Entry information : PblCcP01
Entry ID 5240
Creation 2007-08-29 (Christophe Dunand)
Last sequence changes 2007-08-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-07 (Catherine Mathe (Scipio))
Peroxidase information: PblCcP01
Name PblCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Mucoraceae Phycomyces
Organism Phycomyces blakesleeanus    [TaxId: 4837 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PblCcP01
start..stop
S start..stop
RoCcP02 478 2e-170 3..371 4..367
McirCcP02 468 2e-166 3..367 4..368
RoCcP01 412 2e-144 29..370 1..364
UramCcP02 401 4e-140 95..371 92..369
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 409473..409659 187 N° 2 409272..409425 154 N° 3 409108..409214 107 N° 4 408888..409030 143
N° 5 408702..408830 129 N° 6 408228..408623 396  
complement(join(408228..408623,408702..408830,408888..409030,409108..409214,4092 72..409425,409473..409659))


exon

Literature and cross-references PblCcP01
Literature unpublished, JOE genomic database
DNA ref. JGI genome:   scaffold_16 (409659..408228)
Protein sequence: PblCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   371
PWM (Da):   %s   41775.83  
PI (pH):   %s   6.86
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFLRSALKRIDSSRLVARSAITVSAASAIHSTRASILSAPRLGRGYATDNKPSSNNNLLLFLESLSGMTALGGAAGYYYHNSEKSIKKDIPQKEKAIDYEKIYKEIADMLEDEDYDDGSYGPVLFRLSWHCSGTYDKKTDTGGSNGATRFLPESGHGANKGLDVARNLLDKVHAKHPEISYGDLWTLGGVCAVQEGGPTIPWRPGREDALTAKQCTPDGRLPDGMKKQDHIREIFYRMGFNDQEIVALVGGHTVGRCHLDRSGFEGPWNEAPTIFDNEYFTALVEREWVKKQLPSGIWQWVAKENPDVMMLPAEIYMYNDKEFRKYFELYAKDQDKFFEDFAKAYKKLIELGVHFKDGDKEYKFKTVNV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCTTACGTTCTGCATTAAAGCGTATTGACTCCTCACGCCTGGTAGCAAGATCGGCTATTACAGTCAGTGCTGCATCAGCAATCCATTCTACTCGCGCGAGTATTCTCTCTGCTCCA
AGACTTGGGCGTGGATATGCCACGGACAACAAGCCAAGCAGCAACAATAATCTCCTATTATTTCTAG
GTAATCTTTAATATTTTCCGGTAAAAAATTGCTATATACTAATAAAGAAAGTC
TTTCAGGAATGACTGCTCTTGGTGGTGCTGCTGGATACTACTACCACAACTCTGAGAAATCAATTAAAAAGGACATTCCTCAAAAAGAAAAGGCCATTGATTATGAGAAAATCTACAAAG
AGATTGCTGATATGCTGGAAGACGAAGA
GTAAGTCGATGCAATACTTTAAGAAAATTGGATGGCATTTAATATCGCATTCCTCAGTTACGATGATGGTTCCTACGGACCAGTGTTGTTCC
GCCTCTCCTGGCATTGTTCTGGAACATATGACAAAAAGACTGATACTGGTGGAAGCAATGGTGCAACTATGC
GTAAGAAAATGCAACTGTGTTTTAAAATTCCTAGTCAATTTTTACTTA
TGAGTTTTTTTTGTTGGTGTATATCTTAGGCTTTTTGCCTGAGTCAGGACACGGTGCCAATAAGGGTTTAGACGTTGCTCGTAATCTACTAGATAAGGTGCATGCAAAGCACCCAGAAAT
TAGCTATGGAGATCTGTGGACTCTTGGAGGTGTCTGTGCTGTTCAGGAAATG
GTATGGTGCAAAGCATAACATTCTTGACGTACACATTACTTAATTGTGTTACATTAGGGCGGCCCAAC
AATTCCCTGGAGACCAGGTCGCGAAGATGCTCTTACTGCCAAGCAATGCACGCCAGACGGTCGTCTCCCAGATGGCATGAAGAAACAAGATCATATCCGTGAGATATTCTACCGCATG
GT
AATATTATATACTGATAAAGCATTATATTAGATAAAAAAAAAGATGTGTGTATTAATCAAATTATCTTTATTTTAGGGTTTTAATGACCAAGAGATTGTTGCTCTTGTTGGTGGACACAC
AGTTGGTAGATGCCATCTTGACCGCAGTGGATTTGAGGGTCCATGGAACGAAGCCCCAACTATCTTCGATAATGAGTACTTTACAGCACTTGTGGAGCGAGAGTGGGTTAAGAAACAACT
TCCTTCTGGTATCTGGCAATGGGTCGCAAAAGAGAATCCAGATGTTATGATGCTTCCTGCAGAAATCTACATGTATAATGACAAAGAATTCCGGAAATACTTTGAATTGTATGCCAAAGA
TCAAGACAAGTTCTTTGAAGATTTCGCAAAGGCATACAAGAAACTTATTGAGCTCGGTGTTCACTTTAAGGATGGCGATAAGGAGTATAAGTTCAAGACTGTTAATGTATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCTTACGTTCTGCATTAAAGCGTATTGACTCCTCACGCCTGGTAGCAAGATCGGCTATTACAGTCAGTGCTGCATCAGCAATCCATTCTACTCGCGCGAGTATTCTCTCTGCTCCA
AGACTTGGGCGTGGATATGCCACGGACAACAAGCCAAGCAGCAACAATAATCTCCTATTATTTCTAG
AAAGTCTTTCAGGAATGACTGCTCTTGGTGGTGCTGCTGGATACTACTACCAC
AACTCTGAGAAATCAATTAAAAAGGACATTCCTCAAAAAGAAAAGGCCATTGATTATGAGAAAATCTACAAAGAGATTGCTGATATGCTGGAAGACGAAGA
TTACGATGATGGTTCCTAC
GGACCAGTGTTGTTCCGCCTCTCCTGGCATTGTTCTGGAACATATGACAAAAAGACTGATACTGGTGGAAGCAATGGTGCAACTATGC
GCTTTTTGCCTGAGTCAGGACACGGTGCCAAT
AAGGGTTTAGACGTTGCTCGTAATCTACTAGATAAGGTGCATGCAAAGCACCCAGAAATTAGCTATGGAGATCTGTGGACTCTTGGAGGTGTCTGTGCTGTTCAGGAAATG
GGCGGCCCA
ACAATTCCCTGGAGACCAGGTCGCGAAGATGCTCTTACTGCCAAGCAATGCACGCCAGACGGTCGTCTCCCAGATGGCATGAAGAAACAAGATCATATCCGTGAGATATTCTACCGCATG
GGTTTTAATGACCAAGAGATTGTTGCTCTTGTTGGTGGACACACAGTTGGTAGATGCCATCTTGACCGCAGTGGATTTGAGGGTCCATGGAACGAAGCCCCAACTATCTTCGATAATGAG
TACTTTACAGCACTTGTGGAGCGAGAGTGGGTTAAGAAACAACTTCCTTCTGGTATCTGGCAATGGGTCGCAAAAGAGAATCCAGATGTTATGATGCTTCCTGCAGAAATCTACATGTAT
AATGACAAAGAATTCCGGAAATACTTTGAATTGTATGCCAAAGATCAAGACAAGTTCTTTGAAGATTTCGCAAAGGCATACAAGAAACTTATTGAGCTCGGTGTTCACTTTAAGGATGGC
GATAAGGAGTATAAGTTCAAGACTGTTAATGTATAA

Retrieve as FASTA