Entry information : GmPrx[P]238
Entry ID 530
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2011-12-02 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-02 (Qiang Li)
Peroxidase information: GmPrx[P]238
Name GmPrx[P]238
Class Class III peroxidase     [Orthogroup: Prx034]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type Roots of 'Supernod' plants
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]238
start..stop
S start..stop
GmPrx238 306 6e-105 75..251 165..341
GmPrx238 86 5e-20 1..75 1..74
VuPrx02 280 7e-95 74..251 151..328
VuPrx02 79 2e-17 14..75 1..61
MtPrx74 276 5e-93 75..251 162..338
MtPrx74 74 0.000000000000002 14..75 9..71
SaPrx[P]37 255 7e-86 5..251 2..267
Literature and cross-references GmPrx[P]238
Literature Public Soybean EST Project.
DNA ref. Phytozome 12:   Gm07 (37368155..37365033)
Protein sequence: GmPrx[P]238
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   248
PWM (Da):   %s   27294.29 Transmb domain:   %s   i7-29o
PI (pH):   %s   10.09
Sequence
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Send to Peroxiscan
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MSLPSFVTTF FxSFLFTSFL VFFILYGTSL SSLALHANIT xPPR*LLVNY YAKSCPRVEQ LVGLVTSQQF KESPVKKGRW DGKISTASRV ASNIPHANST VDQLIKLFTS KGLTTQDLVx  LSGAHTIGFV HGKDFVARLY SY*GKAQPNR NMDPKLLHAL RIYCPNFDGD SDIVAPFDAT TQFLFDHAYY GNLLKKLGML ASDQALALEP RTKSIVQDLA KDKQKFIQAF VGAMDKLS*
KMEREKAWRE K 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (several stop codon in frame and exon 2 is missing due to "n"). No prediction from phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTTTTTTTT CGTTTCTATT CACATCTTTC TTAGTTTTCT TCATTTTGTA TGGAACTTCC TTGTCTTCTT TAGCCCTACA TGCCAACATT ACACAnCCCC CTCGCTAGCT TTTAGTAAAT  TACTATGCCA AATCATGCCC TCGGGTAGAA CAACTTGTTG GCTTAGTCAC CTCTCAACAA TTCAAAGAAT CACCTGTGTA GGAGTAAGAC CAATTCCAAA AAAAATGATT TAGCTTTGCA  CTTGCATGCA TGAACTTGTT TTCCTAAATT ATTGTGAAGA AAAATGCCAA TAATATAATT TATGATAAAC TCTTTTGAAT AAACTTTTTA TCATTGATTG AAATTTATTA AAAATATTTG  TTAAGAAAGA TTATTTCTTT AAATAGTAGA TTTTGATATT TGTAAGATAT CACTTTCTGA TTTTTAATTA AAGATACTTT ATATTTATTT AGTATATCAT TAAACGTACT CAAATTGAAC  TCAATTTTCT TAAATAAAAT TTTGGATATA AGACTCTTAA AATGAACAAA AAAACATGAT TAAAAGAATA AAAAATAATA ATAATTTACA TTAATATCAT AATGACTTAA AAAAATATTC  TATTTTCATT AATTTAGTTA TTTCTTTTTT GTTGTTATGC CTTTTAAAGA CACAATGCAT TAGGCATTGG GACAGGCTGG TCTCAATTCT AGATTATCCA AAGTCACTTA ATTTAGCTCT  AGAAAGAGGA AATGGACAAG TTGGTATTGG GTCTAAGTAT TTTCCTACAT CAAACAAAGG TTTTCTATTT TTCTTTTTCA TCAAACTGAT AATTTTGTCA TGAATTTAAC TATTCAGAAT  AACTTTGTCA TTGTTATTTT TTTTTTATGA AAACATTATC ATTGATTTAT ATGATTGTGA AGTACTACTA TGATAGAAGG ATATCATCAA TCATATTGTT CCTCTACGTT TTAAAGACTT  GACTAATGTC AAAGCATCAT TTATCATCAA TGATAAAGAG GCTCAGGTCC ATAATTATAT TTTCTTAATA GAATACTAGG AAAAAATAGG CATTTGGTGT CTAACTGTCC TTTTATGTTT  TTTAAGTAAA ATAATAATAA AAGTTAGTGG ATGGTTTACG AAAATAACTA TAATAATAAA ATAATAACTT ACGGACGTAA TTATAAAAAT AAGTACATCA AAATATTTTT TCTTTATATA  TAATAATAGA TTATAAAACT ATCATTATAT AACAAAAAGC TTAATGTATA AATGCTTGCA AGTGCTATGG GAAGAACTTT TAATTTTTTT ATCTAATTGC TACCAAAAGT GACAAGATTG  ACACGTTGAA TTTGTCAACA TGTGATTGAT TTAGGTGGTA CATATTTGAT TTTGTTTCAG TCTAGAACTA GAATTCTGTG TATAAAAAAC AAAAATTGTA CCGAAAAAGT TAGTTATACT  AATATTTGTG GTTTATGTTT ATGGTTAAGC GGAATTTAGT TGGCAATAAA AATTCTTTGA GAACACCTAC TTTTTTTTAA GTATTCACAA AAGTGGGGTA AAATTATAAT TTTCATCCTT  CGTCTGAAAT CTTGTTTTAA TTTGATTTCC TAAATTTATA AAGTTTCAGT TTGATCCTTG AAGTATATTT GTTAAATCAC ATTAAACAGT GACAAATTGT AAAAAAAAAA ATGTCATGTT  AGCCAAAATT ACTAGTACAA AAAACTTAAG ACTAGTTTAG TCAAATAATT AAGAAACTAA AGGTGAAAAT TTTAAATTAG GATATCAAAT TAAAACAAAA AAAATCAAAT GAAGAAGCTA  AATTATACTT TAGCCATTTG TGTGATAAAA ATTTAGTTGT AAGATGAGTG TTATTAACAC ATTCTAATAT ACTTCATGTA AAATGTTTTT ATTAGTTAAT TTTTATTGAA AAATTATAAA  ATCATGAAAT TTTACTGGAA AGACTTCATT TAAAATTAGA TTTACAAAAT TTCATAACTT TTTCTTTTAT GAATTTCAGT TAATGATAAA AGAATGTTTA AAAGGACATA TCTTTGTAAT  GGTAACCAAT GATGAAGAAA GGAAGATGGG ATGGGAAGAT ATCAACGGCA TCAAGGGTGG CTTCCAACAT CCCTCATGCA AACTCCACCG TTGATCAACT CATCAAACTC TTCACTTCAA  AGGGCCTAAC CACACAAGAC CTAGTAGCnC TATCAGGGGC TCACACAATA GGGTTTGTCC ATGGGAATTT CTTTGTGCAC CAATGTTnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn TAAGTTTTGT GTTTGTAATT TTGGAAAAAA CGAAAAAGTG TTGGGTGTAA AAAAAATGGT AGGTGCACAA AGAAAATCCC TTTGCCCATT GCAAGACTTT GTGGCCCGCC  TCTACAGTTA CTGAGGCAAG GCCCAACCGA ACCGAAATAT GGACCCAAAA CTATTACATG CACTAAGAAT ATATTGTCCA AACTTTGATG GAGACTCTGA CATTGTTGCC CCTTTTGATG  CCACTACCCA ATTCCTATTT GACCATGCCT ATTATGGTAA CTTGCTAAAG AAGTTGGGCA TGTTGGCCTC TGACCAGGCT TTGGCTTTGG AACCGCGAAC CAAGTCCATT GTTCAGGATC 
TTGCAAAGGA CAAGCAGAAG TTTATTCAGG CTTTTGTGGG GGCTATGGAC AAATTGAGCT AGGTGAAAAT GGAGAGGGAA AAAGCATGGA GAGAAAAG 

Retrieve as FASTA