Entry information : OmyPGHS02-1B (ptgs2b / OmyPGHS02b)
Entry ID 5349
Creation 2007-05-14 (Marcel Zamocky)
Last sequence changes 2007-05-14 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-07-16 (Christophe Dunand)
Peroxidase information: OmyPGHS02-1B (ptgs2b / OmyPGHS02b)
Name (synonym) OmyPGHS02-1B (ptgs2b / OmyPGHS02b)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Actinopterygii Salmonidae Oncorhynchus
Organism Oncorhynchus mykiss (Rainbow trout)    [TaxId: 8022 ]
Cellular localisation N/D
Tissue type Genitourinary
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OmyPGHS02-1B
start..stop
S start..stop
PretPGHS03 1087 0 1..609 1..615
MunPGHS02 1084 0 1..609 1..608
FhePGHS01 1078 0 1..609 1..610
TrubPGHS01 1076 0 1..609 1..608
Literature and cross-references OmyPGHS02-1B (ptgs2b / OmyPGHS02b)
Literature Ishikawa T., Herschman H.R. Two inducible, functional cyclooxygenases-2 genes are present in the rainbow trout genome. Submitted (DEC-2006).
Protein ref. UniProtKB:   A3EZK8
mRNA ref. GenBank:   EF175381
Cluster/Prediction ref. UniGene:   Omy.20943
Protein sequence: OmyPGHS02-1B (ptgs2b / OmyPGHS02b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   609 (588)
PWM (Da):   %s   68859.28 (66559.0)  
PI (pH):   %s   7.3 (7.31) Peptide Signal:   %s   cut: 22 range:22-609
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNRIISALLF LPLGIIFVCE GGNPCCSQPC MNRGVCTAMG SEDYECDCTR TGFYGHNCTQ PEFFTWIKVS LKPTPNTVHY LLTNYKGVWN IINSISFLRD AIMRYVLTSR SHLIDSPPTF  NADYNYKSWE AYSNLSYYTR TLPPLPKDCP TPMGVVGKIE LPDAKMLAEK LLIRRKFIPD PQGSSLMFAF FAQHFTHQFF KSDQKMGPAF TKAKGHGVDL GHIYGENLER QHKLRLFKDG  KLKFQVLDGE VYPPTVKEVG ADMHYPPHVP ESHRFAVGHE AFGLVPGLMM YATIWLREHN RVCDVLKEVH PDWDDDRLFQ TSRLILIGET IKIVIEDYVQ HLSGYNFKLK FDPELLFKER  FQYQNRISSE FNTLYHWHPL MPDAFHIQEQ VYSYPQFVFN TSVVTTHGIS NLVASFTKQI AGRVAGGRNV PPAVMMVALK SIENSRQMRY QSLNAYRKRF SMKPYASFED LTGEKEMAAE  LEEMYGHVDA VELYPGLLVE KPRTNAIFGE TMVEMGAPYS LKGLMGNPIC SPEYWKPSTF GGSVGFDIIN TASLQRLVCS NVKGPCPVAS FHVPDVEDNR SNTINSSTAQ SGSNDVNPTV 
LLKEGTTEL 

Retrieve as FASTA  
Remarks Complete sequence from mRNA (EF175381) and 7 ESTs. Cell_line="RTG-2".