Entry information : PnoAPx-CcP01 (SNOG_15967 / PnoAPx-CcP01)
Entry ID 5360
Creation 2007-05-16 (Marcel Zamocky)
Last sequence changes 2012-02-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-09-04 (Catherine Mathe (Scipio))
Peroxidase information: PnoAPx-CcP01 (SNOG_15967 / PnoAPx-CcP01)
Name (synonym) PnoAPx-CcP01 (SNOG_15967 / PnoAPx-CcP01)
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Phaeosphaeriaceae Phaeosphaeria
Organism Phaeosphaeria nodorum (Stagonospora nodorum)    [TaxId: 13684 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PnoAPx-CcP01
start..stop
S start..stop
ClunAPx-CcP02 734 0 1..523 1..523
SturAPx-CcP02 720 0 1..531 1..530
AbraAPx-CcP 710 0 47..531 12..495
COsaAPx-CcP02 692 0 1..520 1..519
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 26731..26869 139 N° 2 25226..26682 1457  
complement(join(25226..26682,26731..26869))


exon

Literature and cross-references PnoAPx-CcP01 (SNOG_15967 / PnoAPx-CcP01)
Literature Birren B.W., Lander E.S., Galagan J.E., Devon K., Nusbaum C., Jaffe D.B., Butler J., Alvarez P., Gnerre S., Grabherr M., Kleber M., Mauceli E.W., Brockman W., Rounsley S., Young S.K., LaButti K., Pushparaj V., DeCaprio D., Crawford M., Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Kodira C.D., Zeng Q., Yandava C., Alvarado L., Oleary S., Oliver R.O., Solomon P. Annotation of the Phaeosphaeria nodorum SN15 genome. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   Q0TWP9
DNA ref. JGI genome:   scaffold_42 (26869..25226)
Protein sequence: PnoAPx-CcP01 (SNOG_15967 / PnoAPx-CcP01)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   531 (513)
PWM (Da):   %s   57467.97 (55587.9)  
PI (pH):   %s   4.88 (4.81) Peptide Signal:   %s   cut: 19 range:19-531
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSSQIISLALLAPISQAYVWPSKYDDLDDLLYMQFGYVRNGQLSDQVQSCDFGAKQPGVQKAAQWVRTAFHDAATYDATTKIGGLDASIQYELDRPENLGAALNSTLADISSLVTTRSSAADLLALSLVMSVARCANMRVPLRLGRKDATEAGIKGVPEAHTDLDTSRKRFATMGMDEADMITLIACGHSIGGVNSVDHPEIVSGPVSPENKASFDTTKGAMDNQVVLEYLDNSTANPLIVNANDTLNSDKRIFAADGNATMRKLADKAYFKSKCENAFERMLNLVPGDVTLSEPIEPADIRPFITQYALNANGSIEFSGRIRVRTTPVTGRDTNNLTASIILPSRSGSSPTEVVAKQATYKLGQTYGYLDEVFLWFEFKTVIPASAAISSFNIRVNDDVYDNAGTGGYPVNPDVLYQAPQSCTFADPTTKQWSITMVAAVSKSLLQGGAEPQLNVVKKPRKPRSFLPELTPEIVKMEHAGKETAEYVYFTATTPLSTDGLDPRVDIEVGDSKVEYILTTALTQQKCAAL

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST. Strain="SN15". Regions of the protein: 67-286 ascorbate peroxidase; up to pos. 531 unknown
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGAGCAGCCAAATAATTAGTCTCGCGCTCCTTGCGCCAATCTCCCAAGCATACGTTTGGCCCAGCAAATACGATGACCTCGATGACCTCCTGTACATGCAATTTGGTTATGTCAGA
AATGGACAGCTTTCAGATC
GTACGTATTCCAATACTGATCCTCTGACCACAACTCACACAACGATAGAGGTTCAGAGCTGCGATTTTGGCGCCAAACAACCTGGCGTACAGAAGGCAGCA
CAGTGGGTGCGAACTGCCTTTCACGATGCGGCGACTTACGATGCGACAACCAAGATCGGTGGCTTAGATGCCTCGATCCAATACGAACTTGACCGACCGGAAAACCTGGGTGCCGCATTG
AATTCTACCTTGGCAGATATCTCAAGTCTGGTCACGACCCGGTCCTCAGCAGCGGATTTGTTGGCTTTGTCGCTAGTAATGTCTGTAGCTCGTTGCGCCAACATGCGCGTCCCATTACGA
CTGGGTCGCAAGGACGCAACAGAGGCCGGCATCAAGGGTGTACCCGAAGCCCACACCGATCTTGACACTTCTCGGAAGAGGTTCGCCACCATGGGTATGGACGAGGCCGACATGATAACG
TTGATTGCCTGTGGTCACAGCATTGGTGGAGTTAATTCGGTTGATCACCCCGAAATCGTTTCCGGACCAGTCAGCCCCGAGAACAAGGCCAGCTTCGACACTACTAAAGGCGCCATGGAC
AACCAAGTTGTACTCGAGTACCTGGATAATTCCACAGCCAATCCCTTGATCGTCAATGCCAACGACACGCTCAATTCCGACAAACGCATATTTGCTGCCGATGGCAATGCAACCATGCGC
AAGCTCGCAGACAAGGCATATTTTAAGTCTAAGTGCGAAAACGCTTTCGAGAGGATGCTCAACCTCGTACCGGGAGACGTTACGCTTTCAGAGCCTATTGAACCAGCTGACATTCGCCCT
TTCATTACGCAGTATGCGCTCAATGCAAATGGTTCTATTGAATTCTCTGGCCGCATCCGTGTTCGCACCACGCCCGTTACCGGCCGGGATACGAACAACCTGACTGCCTCGATCATCCTG
CCCTCGCGCAGCGGCAGCAGCCCAACTGAAGTTGTCGCGAAACAGGCCACCTACAAGCTGGGTCAAACCTATGGATACCTAGACGAGGTATTCCTGTGGTTCGAATTCAAGACAGTAATT
CCTGCGAGCGCAGCTATTAGCTCTTTCAACATCCGCGTCAACGACGATGTTTACGACAATGCCGGAACTGGCGGATACCCCGTCAACCCCGATGTGCTCTATCAAGCGCCGCAATCCTGC
ACATTCGCAGACCCAACCACGAAACAATGGTCGATAACAATGGTTGCTGCCGTGTCAAAAAGTCTTCTGCAGGGTGGAGCTGAGCCTCAACTCAACGTCGTGAAGAAGCCGAGGAAGCCG
CGCAGCTTTCTTCCTGAATTGACGCCGGAAATAGTGAAGATGGAGCACGCGGGTAAAGAGACAGCAGAGTATGTCTATTTTACTGCCACAACTCCTTTATCCACCGATGGTCTCGACCCC
AGGGTGGATATTGAGGTTGGCGATAGTAAAGTGGAGTATATTTTGACAACTGCTCTGACGCAGCAAAAGTGTGCGGCTTTGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGAGCAGCCAAATAATTAGTCTCGCGCTCCTTGCGCCAATCTCCCAAGCATACGTTTGGCCCAGCAAATACGATGACCTCGATGACCTCCTGTACATGCAATTTGGTTATGTCAGA
AATGGACAGCTTTCAGATC
AGGTTCAGAGCTGCGATTTTGGCGCCAAACAACCTGGCGTACAGAAGGCAGCACAGTGGGTGCGAACTGCCTTTCACGATGCGGCGACTTACGATGCGACA
ACCAAGATCGGTGGCTTAGATGCCTCGATCCAATACGAACTTGACCGACCGGAAAACCTGGGTGCCGCATTGAATTCTACCTTGGCAGATATCTCAAGTCTGGTCACGACCCGGTCCTCA
GCAGCGGATTTGTTGGCTTTGTCGCTAGTAATGTCTGTAGCTCGTTGCGCCAACATGCGCGTCCCATTACGACTGGGTCGCAAGGACGCAACAGAGGCCGGCATCAAGGGTGTACCCGAA
GCCCACACCGATCTTGACACTTCTCGGAAGAGGTTCGCCACCATGGGTATGGACGAGGCCGACATGATAACGTTGATTGCCTGTGGTCACAGCATTGGTGGAGTTAATTCGGTTGATCAC
CCCGAAATCGTTTCCGGACCAGTCAGCCCCGAGAACAAGGCCAGCTTCGACACTACTAAAGGCGCCATGGACAACCAAGTTGTACTCGAGTACCTGGATAATTCCACAGCCAATCCCTTG
ATCGTCAATGCCAACGACACGCTCAATTCCGACAAACGCATATTTGCTGCCGATGGCAATGCAACCATGCGCAAGCTCGCAGACAAGGCATATTTTAAGTCTAAGTGCGAAAACGCTTTC
GAGAGGATGCTCAACCTCGTACCGGGAGACGTTACGCTTTCAGAGCCTATTGAACCAGCTGACATTCGCCCTTTCATTACGCAGTATGCGCTCAATGCAAATGGTTCTATTGAATTCTCT
GGCCGCATCCGTGTTCGCACCACGCCCGTTACCGGCCGGGATACGAACAACCTGACTGCCTCGATCATCCTGCCCTCGCGCAGCGGCAGCAGCCCAACTGAAGTTGTCGCGAAACAGGCC
ACCTACAAGCTGGGTCAAACCTATGGATACCTAGACGAGGTATTCCTGTGGTTCGAATTCAAGACAGTAATTCCTGCGAGCGCAGCTATTAGCTCTTTCAACATCCGCGTCAACGACGAT
GTTTACGACAATGCCGGAACTGGCGGATACCCCGTCAACCCCGATGTGCTCTATCAAGCGCCGCAATCCTGCACATTCGCAGACCCAACCACGAAACAATGGTCGATAACAATGGTTGCT
GCCGTGTCAAAAAGTCTTCTGCAGGGTGGAGCTGAGCCTCAACTCAACGTCGTGAAGAAGCCGAGGAAGCCGCGCAGCTTTCTTCCTGAATTGACGCCGGAAATAGTGAAGATGGAGCAC
GCGGGTAAAGAGACAGCAGAGTATGTCTATTTTACTGCCACAACTCCTTTATCCACCGATGGTCTCGACCCCAGGGTGGATATTGAGGTTGGCGATAGTAAAGTGGAGTATATTTTGACA
ACTGCTCTGACGCAGCAAAAGTGTGCGGCTTTGTAG

Retrieve as FASTA