Entry information : XtTPO01
Entry ID 5392
Creation 2007-05-18 (Marcel Zamocky)
Last sequence changes 2007-05-18 (Marcel Zamocky)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2009-10-15 (Christophe Dunand)
Peroxidase information: XtTPO01
Name XtTPO01
Class Thyroid peroxidase     [Orthogroup: TPO001]*
Taxonomy Eukaryota Metazoa Chordata Amphibia Pipidae Xenopus
Organism Xenopus tropicalis    [TaxId: 8364 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value XtTPO01
start..stop
S start..stop
MmulTPO01 317 7e-104 1..225 595..822
PtroTPO 315 9e-104 1..225 520..747
GgoTPO 315 2e-102 1..225 593..820
OanTPO 315 2e-101 1..225 636..864
Literature and cross-references XtTPO01
Literature Tindall,A.J., Morris,I.D., Pownall,M.E. and Isaacs,H.V. Expression of enzymes involved in thyroid hormone metabolism during the early development of Xenopus tropicalis. Biol. Cell 99 (3), 151-163 (2007)
Protein ref. UniProtKB:   A1KCQ3 [Fragment]
DNA ref. JGI genome:   scaffold_199 (1058218..1108867)
mRNA ref. GenBank:   AM406797.1 [Fragment] JGI transcript:   348401 [Fragment]
Protein sequence: XtTPO01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   225
PWM (Da):   %s   24704.82  
PI (pH):   %s   4.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
REFCGLSRLA TPADLINAVS DQKLVAKMIA LYSHPDNIDV WLGGLAEDFL PGARTGPLFA CLIGKQMQAL REGDRFWYEN NNIFTKIQRS ELEKHSLSRV ICDNTGLSHV PLDAFLLGNY 
PDNFVSCDSI PGINLEAWKE SPEKGTTCGS PRKIENGDFA FCSEATVIYS CHSGYRLEGH EEITCQGNEW SNQPPICSDI NECEDQPNGP CHSSAKCKNT LGGFH 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. 5' and 3' ends are missing. No EST. No homolog in X.Laevis!!!