Entry information : LcaNadPrx01
Entry ID 5414
Creation 2007-06-15 (Michele Oliva)
Last sequence changes 2016-01-28 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-28 (Christophe Dunand)
Peroxidase information: LcaNadPrx01
Name LcaNadPrx01
Class NADH peroxidase    [Orthogroup: NadPrx001]
Taxonomy Bacteria Firmicutes Bacilli Lactobacillaceae Lactobacillus
Organism Lactobacillus casei    [TaxId: 1582 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LcaNadPrx01
start..stop
S start..stop
LmeNadPrx01 683 0 1..456 1..456
LbrNadPrx01 679 0 1..456 1..456
EfaNadPrx01 678 0 1..456 1..457
LacNadPrx01 626 0 1..456 1..454
Literature and cross-references LcaNadPrx01
Literature Makarova K.S., et al., Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006).
Protein ref. GenBank:   ABJ69253.1 UniProtKB:   Q03C19
DNA ref. GenBank:   CP000423 (398775..400145) [Sequencing error]
Protein sequence: LcaNadPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   456
PWM (Da):   %s   49656.54  
PI (pH):   %s   4.98
Sequence
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Send to Peroxiscan
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MDKPKIIVVG ASHGGHQSVL ELLHRYPDAD ITMFEAGDFV SFMSCGMELF LENQVTDVND VRNFRPDDLI KRGAHVLNNH EVTAINADVK SVTVRDTKNG TTQDYPYDKL ILSSGVRPNS  LPVPGNDLKN VFLMRGYDWA TNIKAKLEDP AVKHVTIIGA GYIGIEAAEA SRKAGKQVTL LDMIDRPLGT YLDPEMTDIL AKELTDKGVE LKLGVKIEAF TGDEAVSAVK TDAGDVKTDL  VIQAAGIKPA TEWLKGTVNL DKRGFINTDP YLRTNLPDVY AIGDATLVYS IPAQQKVPIA LATVARREAR YLAENIFAEN PARPFKGVVG SSALSVFDYH FAASGLNTFT AKRADVNVHT 
AFYTDSLRPD YVPEANGNPQ VCVNLVFDPQ THRLLGGAVL STYDVTAQGN VLALAVQQQL SLEDLAEADF FFQPGFDRQW SLLNLAAQHA LGEPRF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 334". Annotated in NCBI as "uncharacterized NAD(FAD)-dependent dehydrogenase"
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACAAGC CAAAGATCAT TGTTGTAGGG GCATCACACG GCGGTCACCA AAGCGTCTTA GAACTGTTGC ATCGTTATCC CGATGCAGAC ATTACGATGT TTGAAGCAGG TGATTTTGTT  TCGTTCATGT CCTGCGGGAT GGAACTATTC TTAGAAAATC AAGTAACCGA TGTGAATGAT GTTCGGAATT TTCGTCCAGA CGATTTGATC AAGCGCGGCG CACATGTGTT AAACAACCAT  GAAGTGACGG CAATCAATGC TGATGTGAAA TCCGTCACCG TTCGCGACAC GAAGAACGGC ACGACGCAGG ATTATCCTTA TGACAAATTA ATTCTGAGTT CAGGCGTTCG CCCGAATTCC  TTACCAGTGC CAGGCAACGA TTTGAAGAAT GTCTTCTTGA TGCGTGGCTA CGATTGGGCC ACCAACATCA AGGCCAAGTT AGAAGATCCG GCGGTTAAGC ACGTCACCAT CATCGGTGCC  GGTTATATCG GGATTGAAGC GGCTGAAGCC AGTCGTAAAG CTGGTAAACA AGTAACGTTG TTGGATATGA TTGATCGCCC ACTGGGTACC TATCTGGATC CAGAAATGAC CGACATTCTG  GCCAAGGAAC TCACTGATAA AGGTGTTGAG CTCAAGCTTG GTGTCAAGAT CGAAGCCTTC ACAGGCGATG AAGCTGTTAG CGCCGTCAAA ACGGACGCCG GTGACGTTAA AACCGATCTC  GTGATTCAAG CAGCGGGTAT CAAGCCAGCA ACGGAATGGC TCAAGGGCAC CGTTAACCTT GATAAACGCG GCTTCATCAA CACCGATCCT TATCTGCGGA CCAATTTGCC AGACGTTTAT  GCTATCGGTG ATGCCACTTT GGTTTACTCA ATCCCAGCAC AACAAAAGGT ACCGATTGCC TTGGCAACCG TTGCGCGGCG TGAAGCCCGT TACCTTGCCG AAAACATTTT TGCAGAAAAT  CCAGCACGGC CATTCAAGGG CGTCGTTGGT TCCAGTGCGT TGAGCGTTTT CGACTACCAT TTTGCAGCTA GCGGCCTGAA CACCTTCACA GCTAAACGGG CTGACGTTAA CGTGCATACC  GCTTTCTACA CCGATTCACT GCGGCCAGAC TATGTACCAG AAGCTAACGG CAATCCACAG GTGTGCGTCA ACTTAGTCTT TGACCCGCAA ACTCATCGAC TGTTAGGCGG TGCAGTATTG  TCCACTTACG ACGTGACTGC ACAAGGCAAC GTCTTGGCAC TCGCCGTTCA ACAACAATTA AGCCTTGAAG ACTTGGCTGA AGCCGACTTC TTCTTCCAGC CAGGTTTTGA TCGTCAATGG 
AGCTTGCTGA ACTTGGCTGC GCAACACGCT TTAGGCGAAC CGCGATTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACAAGC CAAAGATCAT TGTTGTAGGG GCATCACACG GCGGTCACCA AAGCGTCTTA GAACTGTTGC ATCGTTATCC CGATGCAGAC ATTACGATGT TTGAAGCAGG TGATTTTGTT  TCGTTCATGT CCTGCGGGAT GGAACTATTC TTAGAAAATC AAGTAACCGA TGTGAATGAT GTTCGGAATT TTCGTCCAGA CGATTTGATC AAGCGCGGCG CACATGTGTT AAACAACCAT  GAAGTGACGG CAATCAATGC TGATGTGAAA TCCGTCACCG TTCGCGACAC GAAGAACGGC ACGACGCAGG ATTATCCTTA TGACAAATTA ATTCTGAGTT CAGGCGTTCG CCCGAATTCC  TTACCAGTGC CAGGCAACGA TTTGAAGAAT GTCTTCTTGA TGCGTGGCTA CGATTGGGCC ACCAACATCA AGGCCAAGTT AGAAGATCCG GCGGTTAAGC ACGTCACCAT CATCGGTGCC  GGTTATATCG GGATTGAAGC GGCTGAAGCC AGTCGTAAAG CTGGTAAACA AGTAACGTTG TTGGATATGA TTGATCGCCC ACTGGGTACC TATCTGGATC CAGAAATGAC CGACATTCTG  GCCAAGGAAC TCACTGATAA AGGTGTTGAG CTCAAGCTTG GTGTCAAGAT CGAAGCCTTC ACAGGCGATG AAGCTGTTAG CGCCGTCAAA ACGGACGCCG GTGACGTTAA AACCGATCTC  GTGATTCAAG CAGCGGGTAT CAAGCCAGCA ACGGAATGGC TCAAGGGCAC CGTTAACCTT GATAAACGCG GCTTCATCAA CACCGATCCT TATCTGCGGA CCAATTTGCC AGACGTTTAT  GCTATCGGTG ATGCCACTTT GGTTTACTCA ATCCCAGCAC AACAAAAGGT ACCGATTGCC TTGGCAACCG TTGCGCGGCG TGAAGCCCGT TACCTTGCCG AAAACATTTT TGCAGAAAAT  CCAGCACGGC CATTCAAGGG CGTCGTTGGT TCCAGTGCGT TGAGCGTTTT CGACTACCAT TTTGCAGCTA GCGGCCTGAA CACCTTCACA GCTAAACGGG CTGACGTTAA CGTGCATACC  GCTTTCTACA CCGATTCACT GCGGCCAGAC TATGTACCAG AAGCTAACGG CAATCCACAG GTGTGCGTCA ACTTAGTCTT TGACCCGCAA ACTCATCGAC TGTTAGGCGG TGCAGTATTG  TCCACTTACG ACGTGACTGC ACAAGGCAAC GTCTTGGCAC TCGCCGTTCA ACAACAATTA AGCCTTGAAG ACTTGGCTGA AGCCGACTTC TTCTTCCAGC CAGGTTTTGA TCGTCAATGG 
AGCTTGCTGA ACTTGGCTGC GCAACACGCT TTAGGCGAAC CGCGATTC 

Retrieve as FASTA