Entry information : LbrNadPrx01
Entry ID 5419
Creation 2007-06-18 (Michele Oliva)
Last sequence changes 2016-01-28 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-28 (Christophe Dunand)
Peroxidase information: LbrNadPrx01
Name LbrNadPrx01
Class NADH peroxidase    [Orthogroup: NadPrx001]
Taxonomy Bacteria Firmicutes Bacilli Lactobacillaceae Lactobacillus
Organism Lactobacillus brevis    [TaxId: 1580 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LbrNadPrx01
start..stop
S start..stop
LmeNadPrx01 748 0 1..456 1..456
LcaNadPrx01 679 0 1..456 1..456
EfaNadPrx01 638 0 1..458 1..459
LacNadPrx01 613 0 1..456 1..454
Literature and cross-references LbrNadPrx01
Literature Makarova et al., Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006)

Protein ref. GenBank:   ABJ65380.1 UniProtKB:   Q03N42
DNA ref. GenBank:   ABJ65380.1 (13454..14830)
Protein sequence: LbrNadPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   458
PWM (Da):   %s   50345.76  
PI (pH):   %s   5.11
Sequence
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Send to Peroxiscan
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MSKTKVIVVG ASHGGHQSVL ELTHKYSNLD IKLFEAGDFI SFMSCGMELY LENSVTSIND VRNFKPADLE KFGTEVYANH EVTKINPENK QVTVKDLRSG KIQSYDYDKL ILSSGVTPND  LPVPGHELKN VYSMRGKDWA EKIKAKLSDP DVKNITVIGA GYIGVEAAEA SIKAGKNVTL IDMINRPLGN YLDTELTDIL SKELTSKGVQ VVTGSKIECY EGTESVSAVK TNDAEYPSDL  IIQAVGVKPN TDWLKGTVEL DKRGWIKTDK YLRTNLPDVY AIGDAVLAYS IPAQRNMPIA LATVARREAR YVVEHIFENT PSMPFSGVVG SSALSVFDYH FATSGLNMTT AQKADIKINT 
SFYKDTLRPA YVPMEKGNTE VYVELDYNPN THQLLGGAVL STYDITAQGN VISLAIQQGL KLEDLAEADF FFQPGFDRQW SLLNLAAQRA LGELEFTK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (plasmid 2, pLVIS2). Strain=" ATCC 367 / JCM 1170".
DNA
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ATGTCGAAGA CAAAAGTTAT TGTTGTTGGT GCCTCGCACG GCGGCCATCA GTCGGTTTTG GAACTTACTC ACAAATACTC AAACCTAGAT ATTAAACTCT TCGAAGCGGG AGATTTTATT  TCTTTTATGT CCTGTGGTAT GGAATTATAT TTAGAAAACA GTGTAACGAG TATTAATGAT GTCCGTAATT TTAAACCTGC AGATCTCGAA AAATTTGGGA CAGAAGTATA TGCCAATCAT  GAAGTGACCA AAATAAATCC AGAAAATAAG CAAGTTACCG TGAAAGATTT AAGATCCGGT AAGATACAGA GCTATGATTA CGATAAATTA ATCTTAAGCT CAGGCGTAAC TCCAAACGAT  TTACCCGTTC CTGGTCATGA GCTAAAAAAC GTTTATTCAA TGCGCGGCAA GGATTGGGCA GAAAAGATCA AAGCAAAATT ATCTGACCCA GATGTTAAAA ATATTACTGT TATTGGTGCT  GGTTACATTG GTGTTGAAGC TGCTGAAGCC AGCATCAAAG CTGGAAAGAA TGTTACATTA ATCGACATGA TTAATCGGCC TCTGGGCAAC TACCTAGATA CCGAATTAAC AGATATTTTA  TCAAAAGAAT TGACTAGCAA AGGCGTTCAA GTTGTCACTG GCTCTAAGAT TGAATGCTAT GAAGGGACTG AATCGGTTTC TGCTGTTAAG ACCAACGATG CAGAATATCC TAGTGACTTG  ATCATTCAAG CTGTTGGAGT TAAACCTAAT ACTGATTGGT TAAAGGGAAC GGTTGAACTA GATAAGCGCG GGTGGATTAA AACTGACAAA TATTTGAGAA CTAATCTGCC TGATGTCTAT  GCCATAGGTG ATGCGGTGTT GGCCTATTCA ATTCCTGCTC AGAGGAACAT GCCGATAGCT TTAGCCACGG TTGCCCGACG TGAAGCCCGT TATGTAGTGG AACACATCTT TGAGAACACA  CCGTCTATGC CATTTTCAGG AGTAGTCGGC TCATCAGCAT TAAGTGTTTT CGACTATCAC TTTGCCACAT CAGGTCTGAA TATGACCACA GCCCAAAAGG CCGATATTAA GATTAACACA  TCTTTTTACA AAGACACTTT ACGTCCAGCT TATGTCCCTA TGGAGAAGGG AAATACAGAG GTCTACGTAG AGCTGGATTA CAATCCAAAC ACTCATCAAC TATTAGGTGG TGCTGTATTG  TCAACTTATG ATATCACTGC CCAAGGTAAT GTTATTTCAT TAGCCATCCA ACAAGGATTA AAACTGGAAG ATTTAGCCGA AGCTGACTTT TTCTTCCAGC CAGGCTTTGA CCGACAGTGG 
AGCCTATTGA ACTTAGCAGC CCAACGTGCT CTTGGTGAAC TTGAGTTTAC AAAATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGAAGA CAAAAGTTAT TGTTGTTGGT GCCTCGCACG GCGGCCATCA GTCGGTTTTG GAACTTACTC ACAAATACTC AAACCTAGAT ATTAAACTCT TCGAAGCGGG AGATTTTATT  TCTTTTATGT CCTGTGGTAT GGAATTATAT TTAGAAAACA GTGTAACGAG TATTAATGAT GTCCGTAATT TTAAACCTGC AGATCTCGAA AAATTTGGGA CAGAAGTATA TGCCAATCAT  GAAGTGACCA AAATAAATCC AGAAAATAAG CAAGTTACCG TGAAAGATTT AAGATCCGGT AAGATACAGA GCTATGATTA CGATAAATTA ATCTTAAGCT CAGGCGTAAC TCCAAACGAT  TTACCCGTTC CTGGTCATGA GCTAAAAAAC GTTTATTCAA TGCGCGGCAA GGATTGGGCA GAAAAGATCA AAGCAAAATT ATCTGACCCA GATGTTAAAA ATATTACTGT TATTGGTGCT  GGTTACATTG GTGTTGAAGC TGCTGAAGCC AGCATCAAAG CTGGAAAGAA TGTTACATTA ATCGACATGA TTAATCGGCC TCTGGGCAAC TACCTAGATA CCGAATTAAC AGATATTTTA  TCAAAAGAAT TGACTAGCAA AGGCGTTCAA GTTGTCACTG GCTCTAAGAT TGAATGCTAT GAAGGGACTG AATCGGTTTC TGCTGTTAAG ACCAACGATG CAGAATATCC TAGTGACTTG  ATCATTCAAG CTGTTGGAGT TAAACCTAAT ACTGATTGGT TAAAGGGAAC GGTTGAACTA GATAAGCGCG GGTGGATTAA AACTGACAAA TATTTGAGAA CTAATCTGCC TGATGTCTAT  GCCATAGGTG ATGCGGTGTT GGCCTATTCA ATTCCTGCTC AGAGGAACAT GCCGATAGCT TTAGCCACGG TTGCCCGACG TGAAGCCCGT TATGTAGTGG AACACATCTT TGAGAACACA  CCGTCTATGC CATTTTCAGG AGTAGTCGGC TCATCAGCAT TAAGTGTTTT CGACTATCAC TTTGCCACAT CAGGTCTGAA TATGACCACA GCCCAAAAGG CCGATATTAA GATTAACACA  TCTTTTTACA AAGACACTTT ACGTCCAGCT TATGTCCCTA TGGAGAAGGG AAATACAGAG GTCTACGTAG AGCTGGATTA CAATCCAAAC ACTCATCAAC TATTAGGTGG TGCTGTATTG  TCAACTTATG ATATCACTGC CCAAGGTAAT GTTATTTCAT TAGCCATCCA ACAAGGATTA AAACTGGAAG ATTTAGCCGA AGCTGACTTT TTCTTCCAGC CAGGCTTTGA CCGACAGTGG 
AGCCTATTGA ACTTAGCAGC CCAACGTGCT CTTGGTGAAC TTGAGTTTAC AAAATAG 

Retrieve as FASTA