Entry information : PpenNadPrx01
Entry ID 5421
Creation 2007-06-18 (Michele Oliva)
Last sequence changes 2016-01-28 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-28 (Christophe Dunand)
Peroxidase information: PpenNadPrx01
Name PpenNadPrx01
Class NADH peroxidase    [Orthogroup: NadPrx001]
Taxonomy Bacteria Firmicutes Bacilli Lactobacillaceae Pediococcus
Organism Pediococcus pentosaceus    [TaxId: 1255 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpenNadPrx01
start..stop
S start..stop
LacNadPrx01 652 0 1..456 1..454
LgNadPrx01 644 0 1..456 1..454
LcaNadPrx01 622 0 1..456 1..456
LmeNadPrx01 617 0 1..456 1..456
Literature and cross-references PpenNadPrx01
Literature Makarova K et al., Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006)
Protein ref. GenBank:   ABJ68640.1 UniProtKB:   Q03DT2
DNA ref. GenBank:   CP000422.1 (1597531..1598901)
Protein sequence: PpenNadPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   456
PWM (Da):   %s   49826.45  
PI (pH):   %s   4.86
Sequence
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Send to Peroxiscan
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MDKVKVIIVG ASHGGHESAI ELLDKYDNVD VTIYEMGDFV SFMSCGMQLY LEDQVTDVND VRNFRPEDIT SKGGKIYNNH QVTAIDVDQK QVTVKDLKAG SEEQVAYDKL ILSSGVTPKN  LPVPGTDLKN VYLMRGYDWA TKIKAALTDD SIKNVAVIGS GYIGIEAAEV FAKKGKHVTL FDFIDRPLGN YLNHEMTEII DKTLTDNGIQ VEMSQSITAF KGDDKVASVE TKKGSYPADL  VIQAAGVQPN TEWLKGVVDL TDRGFINVDG YLRTNVPDVF AIGDAILPLS IPAGKPSPIA LATTARREAQ YVVNHIFEKK PTQIFKGVVG SSALHVFDEH FASTGVNEFT AERSNVEIVN 
SHYVDHIRPA YVPKAEGNVR VDVDITFDPH THIVLGGAVL STADMTAQGN VLALAVEHRL TVEDLAEADF FFQPGYDRQW SLINLAAQHA LGYARF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 25745 / 183-1w".
DNA
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ATGGATAAAG TAAAAGTTAT CATTGTTGGG GCATCACATG GAGGGCACGA ATCGGCGATT GAGCTATTAG ATAAATACGA TAATGTCGAT GTTACGATCT ATGAAATGGG AGATTTCGTA  TCGTTTATGT CGTGTGGGAT GCAACTTTAT TTAGAAGACC AAGTTACAGA CGTTAATGAC GTAAGAAATT TCCGGCCAGA GGATATCACT TCTAAAGGTG GAAAGATTTA TAACAATCAT  CAAGTTACAG CAATTGATGT TGATCAAAAA CAGGTGACAG TCAAAGACCT GAAAGCAGGT TCAGAAGAAC AAGTAGCTTA TGATAAATTA ATTCTTAGTT CAGGAGTAAC ACCTAAGAAT  CTACCGGTAC CAGGCACAGA TCTTAAAAAT GTTTATTTAA TGCGTGGTTA TGACTGGGCA ACTAAGATTA AAGCTGCCTT GACTGATGAT AGCATTAAAA ACGTAGCCGT AATTGGTTCA  GGATATATTG GAATTGAAGC AGCTGAAGTA TTTGCTAAGA AAGGTAAACA CGTCACCTTA TTCGATTTCA TCGACCGTCC CCTCGGAAAT TACCTAAACC ATGAAATGAC GGAAATTATT  GATAAAACAT TAACTGACAA TGGTATTCAA GTAGAAATGA GCCAAAGTAT CACTGCATTT AAAGGCGATG ATAAAGTTGC CAGTGTAGAA ACTAAAAAGG GAAGTTATCC TGCAGATTTG  GTAATTCAAG CTGCGGGTGT CCAACCTAAT ACAGAATGGC TTAAGGGCGT TGTGGACTTG ACTGATCGAG GATTCATCAA TGTAGATGGA TACTTGAGGA CCAATGTGCC AGACGTATTC  GCCATTGGAG ATGCGATCTT ACCATTATCG ATTCCAGCCG GAAAACCATC GCCGATTGCC CTAGCTACAA CCGCCCGTCG AGAAGCTCAA TATGTTGTGA ACCATATTTT TGAAAAGAAA  CCAACTCAAA TTTTTAAGGG AGTTGTTGGT TCATCAGCCT TACATGTGTT TGACGAACAT TTTGCTTCGA CCGGTGTAAA TGAATTTACG GCAGAACGTT CTAATGTTGA AATTGTTAAC  TCACATTACG TAGATCATAT TCGCCCCGCG TATGTTCCCA AGGCGGAAGG AAATGTGCGC GTTGATGTTG ATATCACGTT TGACCCCCAT ACCCACATTG TTTTAGGCGG CGCGGTACTT  TCGACCGCTG ACATGACGGC ACAAGGAAAT GTTTTAGCTT TGGCAGTGGA ACACCGATTG ACGGTAGAAG ACTTGGCTGA AGCAGATTTC TTCTTCCAAC CAGGCTACGA CCGACAATGG 
AGTTTAATTA ATTTAGCTGC GCAACATGCT TTAGGATATG CACGTTTCTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATAAAG TAAAAGTTAT CATTGTTGGG GCATCACATG GAGGGCACGA ATCGGCGATT GAGCTATTAG ATAAATACGA TAATGTCGAT GTTACGATCT ATGAAATGGG AGATTTCGTA  TCGTTTATGT CGTGTGGGAT GCAACTTTAT TTAGAAGACC AAGTTACAGA CGTTAATGAC GTAAGAAATT TCCGGCCAGA GGATATCACT TCTAAAGGTG GAAAGATTTA TAACAATCAT  CAAGTTACAG CAATTGATGT TGATCAAAAA CAGGTGACAG TCAAAGACCT GAAAGCAGGT TCAGAAGAAC AAGTAGCTTA TGATAAATTA ATTCTTAGTT CAGGAGTAAC ACCTAAGAAT  CTACCGGTAC CAGGCACAGA TCTTAAAAAT GTTTATTTAA TGCGTGGTTA TGACTGGGCA ACTAAGATTA AAGCTGCCTT GACTGATGAT AGCATTAAAA ACGTAGCCGT AATTGGTTCA  GGATATATTG GAATTGAAGC AGCTGAAGTA TTTGCTAAGA AAGGTAAACA CGTCACCTTA TTCGATTTCA TCGACCGTCC CCTCGGAAAT TACCTAAACC ATGAAATGAC GGAAATTATT  GATAAAACAT TAACTGACAA TGGTATTCAA GTAGAAATGA GCCAAAGTAT CACTGCATTT AAAGGCGATG ATAAAGTTGC CAGTGTAGAA ACTAAAAAGG GAAGTTATCC TGCAGATTTG  GTAATTCAAG CTGCGGGTGT CCAACCTAAT ACAGAATGGC TTAAGGGCGT TGTGGACTTG ACTGATCGAG GATTCATCAA TGTAGATGGA TACTTGAGGA CCAATGTGCC AGACGTATTC  GCCATTGGAG ATGCGATCTT ACCATTATCG ATTCCAGCCG GAAAACCATC GCCGATTGCC CTAGCTACAA CCGCCCGTCG AGAAGCTCAA TATGTTGTGA ACCATATTTT TGAAAAGAAA  CCAACTCAAA TTTTTAAGGG AGTTGTTGGT TCATCAGCCT TACATGTGTT TGACGAACAT TTTGCTTCGA CCGGTGTAAA TGAATTTACG GCAGAACGTT CTAATGTTGA AATTGTTAAC  TCACATTACG TAGATCATAT TCGCCCCGCG TATGTTCCCA AGGCGGAAGG AAATGTGCGC GTTGATGTTG ATATCACGTT TGACCCCCAT ACCCACATTG TTTTAGGCGG CGCGGTACTT  TCGACCGCTG ACATGACGGC ACAAGGAAAT GTTTTAGCTT TGGCAGTGGA ACACCGATTG ACGGTAGAAG ACTTGGCTGA AGCAGATTTC TTCTTCCAAC CAGGCTACGA CCGACAATGG 
AGTTTAATTA ATTTAGCTGC GCAACATGCT TTAGGATATG CACGTTTCTA A 

Retrieve as FASTA