Entry information : SmedCP01
Entry ID 5441
Creation 2007-06-20 (Michele Oliva)
Last sequence changes 2007-06-20 (Michele Oliva)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2007-08-28 (Christophe Dunand)
Peroxidase information: SmedCP01
Name SmedCP01
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhizobiaceae Sinorhizobium
Organism Sinorhizobium medicae    [TaxId: 110321 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmedCP01
start..stop
S start..stop
SmeCP01 1379 0 42..768 1..727
RetCP01_CFN42 1248 0 42..767 1..726
RleCP01 1247 0 42..768 1..728
RpCP01_CGA009 1194 0 42..768 1..730
Literature and cross-references SmedCP01
Literature Copeland et al.Sequencing of the draft genome and assembly of Sinorhizobium medicae WSM419.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
Protein ref. GenPept:   ABR64103 UniProtKB:   A6UKC3
DNA ref. GenBank:   CP000740 (290410..292599)
Protein sequence: SmedCP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   768
PWM (Da):   %s   84983.51  
PI (pH):   %s   5.93
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTNRVKLRQI MRACAPARMM QRTVRGQAAS ERRSIKEEEM TMDQKTDNAG KCPVAHTAPR GRSNRDWWPD QLDVQVLHRH SDLSDPMGKS FNYAEEFRKL DLDALKRDLH ALMTDSQDWW  PADFGHYGGL FIRMAWHSAG TYRITDGRGG AGQGQQRFAP LNSWPDNANL DKARRLLWPI KQKYGNRISW ADLLILTGNV ALESMGFKTF GFAGGRTDVW EPEELFWGPE GTWLGDERYS  GERQLSEPLA AVQMGLIYVN PEGPNGNPDP VAAAHDIRET FARMAMNDEE TVALIAGGHT FGKTHGAGDP SFIGADPEGG AIEDQGLGWK STFGTGVGKD AITGGPEVTW SQTPTRWSNY  FFENLFNFEW ELSKSPAGAH QWKAKNAEAS VPDAYDATRK HVPTMLTTDL SLRFDPVYEK ISRRFLENPD QFADAFARAW FKLTHRDMGP KVRYLGPEVP AEDLIWQDVI PPVDHELVDD  ADVAGLKAKI LASSLSVQEL VSTAWDSAST FRGSDKRGGA NGARIRLAPQ KDWEVNQPAQ LARVLSVLEG IQRDFNASQA GGKKISLADL IVLAGNAGVE KAARAAGQEI IVPFTPGRMD  ASEAQTDAAS FAALEPRADG FRNYVNSSRL QFMKPEEALV DRAQLLTLTA PEMTVLVGGL RVLKAGQPEH GVFTSRPEAL TNDFFVNLLD MGTQWSPVEG KEGVYEGRDR KTGAARWTGT 
RVDLIFGSHS QLRAFAEVYA QTDAREKFVK DFVAAWTKVM NADRFDLV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (plasmid pSMED02). Strain="WSM419".