Entry information : LpaNadOxd01
Entry ID 5449
Creation 2007-06-21 (Michele Oliva)
Last sequence changes 2016-01-29 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-29 (Christophe Dunand)
Peroxidase information: LpaNadOxd01
Name LpaNadOxd01
Class NADH oxidase     [Orthogroup: NadOxd001]*
Taxonomy Bacteria Firmicutes Bacilli Lactobacillaceae Lactobacillus
Organism Lactobacillus paracasei    [TaxId: 1597 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LpaNadOxd01
start..stop
S start..stop
LcaNadOxd01 387 4e-136 1..189 1..189
PpenNadOxd01 295 2e-100 1..188 1..188
LskNadOxd01 255 1e-84 1..188 1..188
LmeNadOxd01 239 4e-78 1..187 1..187
Literature and cross-references LpaNadOxd01
Literature Goh YJ et al. Identification of a putative operon involved in fructooligosaccharide utilization by Lactobacillus paracasei. Appl. Environ. Microbiol. 72:7518-7530 (2006).
Protein ref. GenBank:   ABK27688.1 UniProtKB:   A0FL40
DNA ref. GenBank:   EF030849.1 (79..644) [Sequencing error]
Protein sequence: LpaNadOxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189
PWM (Da):   %s   20310.38  
PI (pH):   %s   5.18
Sequence
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Send to Peroxiscan
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MKVLVIGATH AGTFATQQIL TEHPDYDVTV YERNSNLSFL SCGIALWVGD HVSDPDKMFY SSPEALAALG ANMQMEHDVL AIDPVAKTVE VKDLKTGNVT TDTYDKLVYT TGSTPIVPNI 
PGIHDTDVHL CKNWHDAKAL KALAPTIKSA IVIGAGYIGA ELAEQYALTD KQVTLIDGLP RVLAKNFDA 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Strain="1195".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAGTTC TTGTTATTGG TGCGACTCAT GCCGGTACAT TCGCAACACA GCAAATTTTG ACAGAGCATC CCGATTACGA CGTGACTGTC TATGAACGAA ATAGCAATCT ATCATTTCTA  TCATGTGGCA TCGCTTTGTG GGTTGGTGAT CATGTCAGTG ATCCTGATAA AATGTTTTAT TCCAGTCCTG AAGCATTGGC TGCGCTGGGT GCTAACATGC AAATGGAGCA TGACGTTTTG  GCGATTGATC CTGTAGCGAA AACGGTTGAA GTCAAGGATC TCAAAACCGG CAACGTGACC ACTGATACAT ATGACAAATT GGTTTACACA ACTGGTTCGA CGCCGATCGT CCCAAACATT  CCGGGCATTC ACGACACGGA TGTTCATCTT TGCAAAAATT GGCATGATGC CAAGGCTTTA AAGGCGCTTG CTCCGACCAT TAAAAGTGCG ATCGTAATCG GTGCCGGCTA TATTGGCGCC 
GAGCTTGCCG AACAGTATGC ACTAACTGAC AAACAAGTTA CCTTGATTGA TGGCTTACCA CGAGTGTTGG CGAAAAACTT TGACGCG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAGTTC TTGTTATTGG TGCGACTCAT GCCGGTACAT TCGCAACACA GCAAATTTTG ACAGAGCATC CCGATTACGA CGTGACTGTC TATGAACGAA ATAGCAATCT ATCATTTCTA  TCATGTGGCA TCGCTTTGTG GGTTGGTGAT CATGTCAGTG ATCCTGATAA AATGTTTTAT TCCAGTCCTG AAGCATTGGC TGCGCTGGGT GCTAACATGC AAATGGAGCA TGACGTTTTG  GCGATTGATC CTGTAGCGAA AACGGTTGAA GTCAAGGATC TCAAAACCGG CAACGTGACC ACTGATACAT ATGACAAATT GGTTTACACA ACTGGTTCGA CGCCGATCGT CCCAAACATT  CCGGGCATTC ACGACACGGA TGTTCATCTT TGCAAAAATT GGCATGATGC CAAGGCTTTA AAGGCGCTTG CTCCGACCAT TAAAAGTGCG ATCGTAATCG GTGCCGGCTA TATTGGCGCC 
GAGCTTGCCG AACAGTATGC ACTAACTGAC AAACAAGTTA CCTTGATTGA TGGCTTACCA CGAGTGTTGG CGAAAAACTT TGACGCG 

Retrieve as FASTA