Entry information : NtRboh04_BelW3 (NtRbohD_BelW3)
Entry ID 5484
Creation 2007-07-06 (Christophe Dunand)
Last sequence changes 2011-04-22 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2017-01-12 (Catherine Mathe)
Peroxidase information: NtRboh04_BelW3 (NtRbohD_BelW3)
Name (synonym) NtRboh04_BelW3 (NtRbohD_BelW3)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue types Leaves
Senescing leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtRboh04_BelW3
start..stop
S start..stop
NtRboh04_bottom 1919 0 1..938 1..939
NbRboh02 1914 0 1..938 1..939
LeRboh02 1833 0 1..938 1..938
StRboh03 1812 0 1..938 1..938
Literature and cross-references NtRboh04_BelW3 (NtRbohD_BelW3)
Literature Wohlgemuth H., Kschieschan S., Gruen S., Sandermann H., Langebartels C. Ozone sensitivity of the biomonitor plant, tobacco Bel W3, is based on activation of NADPH oxidase.
Protein ref. UniProtKB:   Q8LRN5
mRNA ref. GenBank:   AF506374
Cluster/Prediction ref. UniGene:   Nta.3862
Protein sequence: NtRboh04_BelW3 (NtRbohD_BelW3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   938
PWM (Da):   %s   105641.78 Transmb domain:   %s   o367-389i449-471o509-531i544-566o581-599i733-750o
PI (pH):   %s   9.28
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQNSENHHPH HQHHHSDTEI IGNDRASYSG PLSGPLNKRG GKKSARFNIP ESTDIGTSVG TGGKSNDDAY VEITLDVRED SVAVHSVKTA GGDDVEDPEL ALLAKGLEKK STLGSSLVRN  ASSRIRQVSQ ELRRLASLNK RPIPTGRFDR NKSAAAHALK GLKFISKTDG GAGWAAVEKR FDEITASTTG LLPRAKFGEC IGMNKESKEF AVELYDALAR RRNITTDSIN KAQLKEFWDQ  VADQSFDSRL QTFFDMVDKD ADGRITEEEV REIIGLSASA NRLSTIQKQA DEYAAMIMEE LDPNNLGYIM IENLEMLLLQ APNQSVQRGG ESRNLSQMLS QKLKHTQERN PIVRWYKSFM  YFLLDNWQRV WVLLLWIGIM AGLFTWKYIQ YKEKAAYKVM GPCVCFAKGA AETLKLNMAI ILFPVCRNTI TWLRNKTRLG AAVPFDDNLN FHKVIAVAIA LGVGIHGLSH LTCDFPRLLN  ASEEEYEPMK YYFGDQPESY WWFIKGVEGV TGIIMVVLMA IAFTLATPWF RRNRVSLPKP FHKLTGFNAF WYSHHLFVIV YTLFIVHGEK LYITKDWYKR TTWMYLTIPI ILYASERLIR  AFRSSIKAVK ILKVAVYPGN VLALHMSKPQ GYKYKSGQYM FVNCAAVSPF EWHPFSITSA PGDDYLSVHI RTLGDWTRQL KTVFSEVCQP PPNGKSGLLR ADYLQGENNP NFPRVLIDGP  YGAPAQDYKK YEVVLLVGLG IGATPMISIV KDIVNNMKAM DEEENSLEDG HNNNMAPNSS PNIAKNKGNK SGSASGGNNF NTRRAYFYWV TREQGSFDWF KGIMNEAAEM DHKGVIEMHN 
YCTSVYEEGD ARSALITMLQ SLHHAKNGVD IVSGTRVKSH FAKPNWRNVY KRIALNHPEA KVGVFYCGAP ALTKELRQHA LDFSHKTSTK FDFHKENF 

Retrieve as FASTA  
Remarks Complete sequence from 2 mRNA and 2 ESTs. Cultivar="Bel W3" and "Hicks Broadleaf".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAAAATT CGGAAAATCA TCATCCGCAC CACCAGCACC ACCATTCGGA CACAGAGATA ATTGGAAATG ATAGAGCGTC GTACAGTGGT CCGTTAAGCG GACCGTTAAA CAAACGAGGC  GGCAAAAAGA GTGCGAGATT TAACATTCCT GAATCTACCG ACATCGGAAC CAGTGTCGGA ACCGGCGGCA AGTCCAATGA TGATGCGTAC GTTGAAATCA CTCTCGATGT CCGCGAAGAT  TCCGTCGCTG TCCACAGTGT CAAAACTGCC GGCGGTGATG ACGTGGAAGA TCCCGAGCTG GCTTTATTGG CTAAAGGCTT AGAGAAGAAG TCCACTTTAG GATCTTCACT TGTTCGAAAT  GCTTCGTCTA GAATTCGGCA AGTGTCACAA GAGCTCAGGC GTTTGGCTTC CTTAAATAAA CGCCCAATTC CTACTGGAAG GTTCGACAGG AATAAATCAG CTGCTGCTCA TGCTCTTAAA  GGTCTCAAGT TTATTAGTAA GACCGACGGC GGCGCTGGTT GGGCCGCCGT CGAGAAGCGG TTCGATGAGA TTACTGCTTC TACTACTGGT TTGCTTCCTC GTGCCAAATT TGGAGAATGT  ATAGGTATGA ATAAGGAGTC TAAGGAATTT GCTGTTGAGC TATATGATGC GCTAGCTCGG AGGAGAAACA TTACAACTGA TTCCATTAAC AAAGCACAGC TCAAAGAGTT CTGGGACCAA  GTGGCTGACC AAAGTTTTGA TTCTCGCCTT CAAACATTTT TTGACATGGT TGATAAAGAT GCTGATGGTA GAATTACAGA AGAAGAAGTC AGAGAGATTA TAGGCCTTAG CGCGTCGGCC  AACAGGCTGT CAACAATCCA GAAACAAGCT GATGAATACG CAGCAATGAT CATGGAAGAG TTGGATCCTA ACAACCTCGG ATACATTATG ATTGAGAACT TGGAAATGCT TTTACTGCAA  GCACCAAATC AATCAGTGCA AAGAGGAGGC GAAAGTCGGA ACTTGAGTCA AATGCTAAGT CAAAAACTAA AGCATACACA AGAGAGAAAT CCAATAGTAA GATGGTACAA GAGTTTCATG  TACTTTTTGC TGGATAATTG GCAAAGAGTT TGGGTATTGT TACTGTGGAT TGGAATTATG GCTGGTCTAT TTACATGGAA ATATATACAG TATAAAGAAA AAGCTGCATA TAAAGTCATG  GGTCCCTGTG TGTGTTTTGC CAAAGGTGCT GCTGAAACAC TCAAGCTCAA CATGGCAATT ATTTTATTTC CGGTTTGCAG AAACACGATC ACATGGCTTC GAAATAAGAC CAGATTAGGT  GCTGCTGTTC CTTTTGATGA TAACCTTAAT TTTCACAAAG TGATAGCAGT GGCAATTGCT CTTGGGGTTG GAATACACGG ACTATCTCAC TTGACATGTG ATTTTCCTCG GCTTTTAAAT  GCTAGTGAAG AAGAATATGA ACCAATGAAG TACTATTTTG GAGATCAGCC AGAAAGCTAT TGGTGGTTTA TAAAAGGAGT AGAAGGGGTA ACTGGAATTA TAATGGTGGT TTTAATGGCA  ATAGCATTTA CTCTAGCAAC CCCATGGTTT AGAAGGAATA GAGTTAGTTT GCCAAAACCA TTTCACAAAC TCACTGGATT TAATGCCTTT TGGTACTCTC ACCATCTCTT TGTTATTGTC  TACACTCTGT TCATTGTGCA TGGTGAAAAG CTATACATTA CCAAAGATTG GTACAAGAGA ACGACATGGA TGTACTTAAC TATCCCAATC ATACTCTATG CTAGTGAAAG GTTGATTAGG  GCATTCAGGT CAAGCATTAA AGCTGTTAAG ATTTTGAAGG TGGCAGTATA TCCAGGAAAT GTGTTGGCAC TTCACATGTC AAAACCACAG GGCTACAAAT ACAAAAGTGG GCAATACATG  TTTGTCAACT GTGCTGCAGT TTCTCCATTT GAGTGGCATC CATTTTCAAT TACTTCGGCC CCAGGAGATG ACTATCTCAG TGTCCATATT CGAACTCTTG GTGATTGGAC CAGACAACTT  AAAACTGTTT TCTCCGAGGT TTGCCAGCCA CCACCTAATG GAAAAAGTGG ACTCCTCAGA GCTGACTACT TGCAAGGAGA GAATAATCCT AATTTCCCAA GGGTGTTAAT AGATGGACCA  TATGGAGCAC CAGCACAAGA CTACAAGAAA TATGAGGTGG TTTTGTTGGT AGGTCTTGGA ATTGGAGCTA CACCAATGAT CAGTATTGTT AAAGACATTG TCAACAACAT GAAGGCAATG  GACGAAGAAG AAAATTCCTT GGAAGATGGA CACAATAATA ATATGGCACC AAATTCTAGC CCCAATATTG CAAAAAATAA GGGTAATAAA TCAGGTTCAG CAAGTGGAGG AAATAATTTC  AATACAAGGA GAGCATATTT CTATTGGGTT ACTAGAGAAC AAGGTTCATT TGATTGGTTC AAAGGTATAA TGAATGAAGC TGCTGAAATG GACCATAAGG GAGTAATTGA AATGCATAAT  TATTGTACTA GTGTTTATGA AGAAGGTGAT GCTCGTTCTG CTCTTATTAC TATGCTTCAG TCTCTTCACC ATGCCAAAAA TGGTGTTGAC ATTGTCTCTG GCACCAGAGT TAAGTCACAT  TTTGCTAAAC CTAATTGGCG TAATGTCTAC AAACGCATTG CTCTCAACCA CCCTGAGGCT AAAGTTGGGG TCTTCTATTG TGGGGCACCA GCACTGACCA AAGAACTAAG ACAACACGCC 
TTGGATTTTT CACACAAGAC ATCTACCAAG TTTGATTTCC ATAAAGAAAA TTTTTGA 

Retrieve as FASTA