Entry information : OsRboh03 (Os01g0835500 / OsNox03 / OsRbohE)
Entry ID 5565
Creation 2007-07-18 (Christophe Dunand)
Last sequence changes 2007-07-18 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: OsRboh03 (Os01g0835500 / OsNox03 / OsRbohE)
Name (synonym) OsRboh03 (Os01g0835500 / OsNox03 / OsRbohE)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Flowers
Inflorescences
Leaves
Roots
Seeds
Stems
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsRboh03
start..stop
S start..stop
SbRboh05 1558 0 19..843 28..854
ZmRboh03 1528 0 18..843 37..852
OsRboh04 1377 0 22..843 9..819
ZmRboh09 1362 0 36..843 24..822
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 35806557..35806932 376 N° 2 35807517..35807679 163 N° 3 35807789..35807837 49 N° 4 35807943..35808866 924
N° 5 35808954..35809049 96 N° 6 35809142..35809257 116 N° 7 35809345..35809447 103 N° 8 35809570..35809658 89
N° 9 35809750..35809900 151 N° 10 35809995..35810141 147 N° 11 35810238..35810366 129 N° 12 35810451..35810529 79
N° 13 35810616..35810725 110  
join(35806557..35806932,35807517..35807679,35807789..35807837,35807943..35808866 ,35808954..35809049,35809142..35809257,35809345..35809447,35809570..35809658,358 09750..35809900,35809995..35810141,35810238..35810366,35810451..35810529,3581061 6..35810725)


exon

Literature and cross-references OsRboh03 (Os01g0835500 / OsNox03 / OsRbohE)
Literature Sasaki T., et al., The genome sequence and structure of rice chromosome 1. Nature 420:312-316(2002).
Protein ref. UniProtKB:   Q8S1T0   Q5QMH3 [Incorrect splicing]   Q5QMH4 [Incorrect splicing]
DNA ref. GenBank:   NC_008394.1 (35806557..35810722)
mRNA ref. GenBank:   AK100241 [Sequencing error]
Cluster/Prediction ref. UniGene:   Os.91330
Protein sequence: OsRboh03 (Os01g0835500 / OsNox03 / OsRbohE)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   843
PWM (Da):   %s   94582.5 Transmb domain:   %s   o293-311i426-448o474-496i661-678o
PI (pH):   %s   9.75
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASPYDHQSPHAQHPSGLPRPPGAGAGAAAGGFARGLMKQPSRLASGVRQFASRVSMKVPEGVGGMRPGGGRMTRMQSSAQVGLRGLRFLDKTSGGKEGWKSVERRFDEMNRNGRLPKESFGKCIGMGDSKEFAGELFVALARRRNLEPEDGITKEQLKEFWEEMTDQNFDSRLRIFFDMCDKNGDGMLTEDEVKVIILSASANKLAKLKGHAATYASLIMEELDPDDRGYIEIWQLETLLRGMVSAQAAPEKMKRTTSSLARTMIPSRYRSPLKRHVSRTVDFVHENWKRIWLVALWLAVNVGLFAYKFEQYERRAAFQVMGHCVCVAKGAAEVLKLNMALILLPVCRNTLTTLRSTALSHVIPFDDNINFHKVIAATIAAATAVHTLAHVTCDFPRLINCPSDKFMATLGPNFGYRQPTYADLLESAPGVTGILMIIIMSFSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHLLVLAYVLLVVHSYFIFLTREWYKKTTWMYLIVPVLFYACERTIRKVRENNYRVSIVKAAIYPGNVLSLHMKKPPGFKYKSGMYLFVKCPDVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTTELRNLFGACEAQVTSKKATLSRLETTVVADAQTEDTRFPKVLIDGPYGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNEVESIHGSEIGSFKNNGPGRAYFYWVTREQGSFEWFKGVMNDVAESDHNNIIEMHNYLTSVYEEGDARSALIAMVQSLQHAKNGVDIVSGSRIRTHFARPNWRKVFSDLANAHKNSRIGVFYCGSPTLTKQLKDLSKEFSQTTTTRFHFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo, 12 introns), 4 mRNA and 26 ESTs. Three SwissProt/TREMBL accessions: Q8S1T0, Q5QMH4 (uncorrect prediction) and Q5QMH3 (uncorrect prediction).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCGCCGTACGACCACCAGTCGCCGCATGCGCAGCACCCGTCGGGGTTGCCGAGGCCGCCGGGGGCGGGGGCGGGTGCGGCGGCGGGCGGGTTCGCGCGGGGGCTGATGAAGCAG
CCGTCGCGGCTGGCGTCCGGGGTGAGGCAGTTCGCGTCGAGGGTGTCGATGAAGGTGCCGGAGGGGGTGGGGGGGATGCGGCCCGGTGGCGGGAGGATGACGCGGATGCAGTCCAGCGCG
CAGGTGGGGCTCCGGGGGCTCCGCTTCCTCGACAAGACGTCCGGCGGGAAGGAGGGGTGGAAGTCCGTCGAGCGCCGCTTCGACGAGATGAACCGCAACGGCCGCCTCCCCAAGGAGAGC
TTCGGCAAGTGCATCG
GTGAGTCCCCGGCCCGCAGCTTCCATCGATGGTGCGATCCAGAAACAGATAGCCGTAAATTCAGTTCCAAAAGGGCGATTAGTTGTTGCTAACAAGAACACAGC
AGAAATATCTCTGATTGAAGGAATATTGTGTTGGCGCCATCTTTCTTGTTTTCTGTCAATCATTTTTATGCTCCGCAACAGTTGTGTGATGATGCCGTGAACTGTTCATCTTTGCCCAAA
GAGTTGGCAGGGACAGCTCTGCCTAACTGAGATCGGCTCTTTGCTTCTCAACTAATCCCCTCGAATTAATGCTTTTGCTTTGCGAAATGGTCCATTATTAAGCAGTAAATCGGTACAGCA
AAAGAAACGAGTACTCTGTACTTCTCTTTTGTTATTGCACATGCTTACGGAGAAAATGGAGTTATAGCGACCGGTTCATGCTGGAGGCAGTTAGGCGATCGATGGAATAATAATCGTGTA
GCGCTAAGCGAATCATTTCTCTTTTTAGATAGTTTGGATGTCTAACAATGCCCATGATTCATGATCTTTTAATTGAACTAAGAAAAATTAATCCATGGTGGATCTGCTTGGCATCAAAAG

GCATGGGGGACTCCAAGGAGTTCGCCGGCGAGCTGTTCGTGGCGCTGGCGCGGCGGAGGAACCTGGAGCCGGAGGACGGCATCACCAAGGAGCAGCTCAAGGAGTTCTGGGAGGAGATGA
CCGACCAGAACTTCGACTCGCGGCTTCGCATTTTCTTTGACAT
GTAATGGTTCACCGTCCCAGTTATAATTTCCAAGATGAACACGATAAATCGATCGCCAACTGACGAAATGGATTTTT
TTTTTCCTTCCCCCTCTCTCTGATGCATCCAGGTGCGACAAGAATGGCGATGGGATGCTCACGGAAGATGAGGTCAAGGAGGTGAGGACGAAAGAATTCTTCTGGATTGGATCTCATCTG
CCATTCTGGAACATGGAGAGAGAGGATTAAATATCGTTTTCTTGTTTGGCTGGAATGGATTTGCAGGTTATTATACTGAGTGCGTCGGCGAACAAGCTGGCGAAGCTGAAGGGACACGCG
GCGACGTACGCGTCGCTGATCATGGAGGAGCTGGACCCGGACGACCGCGGGTACATCGAGATCTGGCAGCTGGAGACGCTGCTGCGCGGCATGGTGAGCGCGCAGGCGGCGCCGGAGAAG
ATGAAGCGGACGACGTCGAGCCTCGCGAGGACGATGATCCCGTCGCGGTACCGGAGCCCGCTGAAGCGGCACGTGTCCAGGACGGTGGACTTCGTGCACGAGAACTGGAAGCGGATCTGG
CTCGTCGCGCTGTGGCTCGCCGTCAACGTCGGCCTCTTCGCCTACAAGTTCGAGCAGTACGAGCGGCGCGCCGCGTTCCAGGTGATGGGCCACTGCGTGTGCGTGGCCAAGGGCGCCGCC
GAGGTGCTCAAGCTCAACATGGCGCTCATCCTCCTCCCCGTGTGCCGGAACACGCTCACCACGCTCAGGTCCACGGCGCTCAGCCACGTCATCCCCTTCGACGACAACATCAACTTCCAC
AAGGTGATCGCGGCGACCATCGCCGCCGCCACCGCCGTCCACACGCTGGCGCACGTCACCTGCGACTTCCCGAGGCTGATCAACTGCCCCAGCGACAAGTTCATGGCGACGCTGGGGCCG
AACTTCGGGTACAGGCAGCCGACGTACGCCGACCTGCTGGAGAGCGCCCCCGGCGTCACCGGCATCCTCATGATCATCATCATGTCCTTCTCCTTCACGCTGGCCACGCACTCCTTCCGC
CGGAGCGTCGTCAAGCTGCCGTCGCCGCTGCACCACCTCGCCGGCTTCAACGCCTTCTGGTACGCGCACCACCTCCTGGTGCTCGCCTACGTCCTCCTCGTCGTGCACTCCTACTTCATA
TTCCTCACCAGGGAGTGGTACAAGAAAACG
GTAAAATTCTCATCAGGCGCTCGATCTTCCTGTGACTGCAATGAAATTAAGTGACATCATCTCAAAATGTCAATCTTGTTCCTGCAGACA
TGGATGTACCTGATAGTCCCAGTGCTCTTCTATGCATGCGAGAGAACGATCAGAAAAGTTCGAGAGAACAACTACCGCGTGAGCATCGTCAAG
GTAAGCAGCTGACTCATGTAACTGGGA
TCCATTCTTTCTTAGCTGTTTGCCTGTTACTCATAAAATTGGTGATGTGGGTGTGGCACATGCAGGCAGCGATTTACCCAGGAAATGTGCTCTCTCTTCACATGAAGAAGCCGCCGGGTT
TCAAGTACAAGAGCGGGATGTACCTGTTTGTGAAGTGCCCTGATGTCTCTCCTTTCGAATG
GTAACCAATTCACCCTTGTCGCATGAATGCATGTCCAAAATGTGGTTTATCTGAGACTA
TTTCTAACTGTTTTTCCTGCCTTTGCAGGCATCCCTTCTCCATCACTTCTGCACCTGGAGATGACTACCTGAGTGTGCATATCCGTACACTAGGTGACTGGACGACTGAACTCAGAAACC
TGTTTGGGAAG
GTCAGTTGAGGCAGCACAGCTGCAAAGAGTTGCAAGAACAATTAGTTTCCCTCGTTAAACAATTCTAGGAGAATAATGCAGATTGCCAAAAGATGGAGAACTAAATCTT
AGTATTCATGTAGGCTTGCGAGGCACAGGTTACTTCTAAGAAGGCTACCCTTTCAAGACTTGAAACTACAGTTGTGGCGGACGCTCAGACAGAGGATACTAGGTGACTAGAGAAGCTCTT
CTATTTCACCTACCAAATGCATTTGGTCTACAATCATTTTCTAACCCTGGTTATCTTCACAATGTTGCTTCAGGTTTCCTAAGGTCCTTATTGATGGGCCCTATGGTGCACCGGCGCAAA
ACTACAAGAAGTATGACATTCTTTTGCTTATTGGTCTTGGAATTGGTGCTACTCCTTTCATCAGCATTCTGAAGGATCTGTTGAACAACATTAAATCCAACGAA
GTAAAATTCTTCCCTG
ATAAATAGTGTTTCCTTATTTCCTACAATGTTGTATAACTGGAGGAAATAGATAACTAAAATGAGTTGATGGCAACAGGAGGTGGAAAGCATACATGGTTCTGAGATAGGCAGCTTCAAG
AACAATGGGCCAGGAAGAGCTTACTTCTACTGGGTGACCAGAGAGCAAGGGTCCTTCGAGTGGTTTAAAGGAGTCATGAACGATGTCGCTGAAAGTGATCACAAT
GTACTGTCTCACTCT
CAATTCTTCGCTGTATTTTCAAATTTCCATAGTTCCTTCAGTCATAGATAGAACATAAACTAATATATGTGGGAATTGCAGAATATTATAGAGATGCACAATTACCTGACCAGCGTGTAT
GAAGAAGGCGACGCAAGGTCAGCTTTGATTGCCATGGTTCAGTCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCCGGCAGCAGG
GTATTCGACATCTTCCCCCTCTTCTATCTG
AAATACTTATTTATTTCCAGTGTATTCCTCTTATTTCTGATTGATCTGTTGCAGATTCGCACACATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCTGACTTGGCGAATGCCCACAAA
AACTCACGCATAG
GTGAGCCTCTTTTTTCAGCGAACATCGTCGATGCAACAATTTTGAGCTTTGCAGTAACGGTTGTTAACAAATCCATAAATATGCAGGTGTTTTCTATTGTGGATCCC
CTACACTCACGAAACAACTCAAGGATCTTTCAAAAGAATTCAGCCAGACAACCACAACTAGATTCCACTTCCACAAGGAAAACTTTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCGCCGTACGACCACCAGTCGCCGCATGCGCAGCACCCGTCGGGGTTGCCGAGGCCGCCGGGGGCGGGGGCGGGTGCGGCGGCGGGCGGGTTCGCGCGGGGGCTGATGAAGCAG
CCGTCGCGGCTGGCGTCCGGGGTGAGGCAGTTCGCGTCGAGGGTGTCGATGAAGGTGCCGGAGGGGGTGGGGGGGATGCGGCCCGGTGGCGGGAGGATGACGCGGATGCAGTCCAGCGCG
CAGGTGGGGCTCCGGGGGCTCCGCTTCCTCGACAAGACGTCCGGCGGGAAGGAGGGGTGGAAGTCCGTCGAGCGCCGCTTCGACGAGATGAACCGCAACGGCCGCCTCCCCAAGGAGAGC
TTCGGCAAGTGCATCG
GCATGGGGGACTCCAAGGAGTTCGCCGGCGAGCTGTTCGTGGCGCTGGCGCGGCGGAGGAACCTGGAGCCGGAGGACGGCATCACCAAGGAGCAGCTCAAGGAG
TTCTGGGAGGAGATGACCGACCAGAACTTCGACTCGCGGCTTCGCATTTTCTTTGACAT
GTGCGACAAGAATGGCGATGGGATGCTCACGGAAGATGAGGTCAAGGAGGTTATTATACTG
AGTGCGTCGGCGAACAAGCTGGCGAAGCTGAAGGGACACGCGGCGACGTACGCGTCGCTGATCATGGAGGAGCTGGACCCGGACGACCGCGGGTACATCGAGATCTGGCAGCTGGAGACG
CTGCTGCGCGGCATGGTGAGCGCGCAGGCGGCGCCGGAGAAGATGAAGCGGACGACGTCGAGCCTCGCGAGGACGATGATCCCGTCGCGGTACCGGAGCCCGCTGAAGCGGCACGTGTCC
AGGACGGTGGACTTCGTGCACGAGAACTGGAAGCGGATCTGGCTCGTCGCGCTGTGGCTCGCCGTCAACGTCGGCCTCTTCGCCTACAAGTTCGAGCAGTACGAGCGGCGCGCCGCGTTC
CAGGTGATGGGCCACTGCGTGTGCGTGGCCAAGGGCGCCGCCGAGGTGCTCAAGCTCAACATGGCGCTCATCCTCCTCCCCGTGTGCCGGAACACGCTCACCACGCTCAGGTCCACGGCG
CTCAGCCACGTCATCCCCTTCGACGACAACATCAACTTCCACAAGGTGATCGCGGCGACCATCGCCGCCGCCACCGCCGTCCACACGCTGGCGCACGTCACCTGCGACTTCCCGAGGCTG
ATCAACTGCCCCAGCGACAAGTTCATGGCGACGCTGGGGCCGAACTTCGGGTACAGGCAGCCGACGTACGCCGACCTGCTGGAGAGCGCCCCCGGCGTCACCGGCATCCTCATGATCATC
ATCATGTCCTTCTCCTTCACGCTGGCCACGCACTCCTTCCGCCGGAGCGTCGTCAAGCTGCCGTCGCCGCTGCACCACCTCGCCGGCTTCAACGCCTTCTGGTACGCGCACCACCTCCTG
GTGCTCGCCTACGTCCTCCTCGTCGTGCACTCCTACTTCATATTCCTCACCAGGGAGTGGTACAAGAAAACG
ACATGGATGTACCTGATAGTCCCAGTGCTCTTCTATGCATGCGAGAGA
ACGATCAGAAAAGTTCGAGAGAACAACTACCGCGTGAGCATCGTCAAG
GCAGCGATTTACCCAGGAAATGTGCTCTCTCTTCACATGAAGAAGCCGCCGGGTTTCAAGTACAAGAGCGGG
ATGTACCTGTTTGTGAAGTGCCCTGATGTCTCTCCTTTCGAATG
GCATCCCTTCTCCATCACTTCTGCACCTGGAGATGACTACCTGAGTGTGCATATCCGTACACTAGGTGACTGGACG
ACTGAACTCAGAAACCTGTTTGGGAAG
GCTTGCGAGGCACAGGTTACTTCTAAGAAGGCTACCCTTTCAAGACTTGAAACTACAGTTGTGGCGGACGCTCAGACAGAGGATACTAGGTTT
CCTAAGGTCCTTATTGATGGGCCCTATGGTGCACCGGCGCAAAACTACAAGAAGTATGACATTCTTTTGCTTATTGGTCTTGGAATTGGTGCTACTCCTTTCATCAGCATTCTGAAGGAT
CTGTTGAACAACATTAAATCCAACGAA
GAGGTGGAAAGCATACATGGTTCTGAGATAGGCAGCTTCAAGAACAATGGGCCAGGAAGAGCTTACTTCTACTGGGTGACCAGAGAGCAAGGG
TCCTTCGAGTGGTTTAAAGGAGTCATGAACGATGTCGCTGAAAGTGATCACAAT
AATATTATAGAGATGCACAATTACCTGACCAGCGTGTATGAAGAAGGCGACGCAAGGTCAGCTTTG
ATTGCCATGGTTCAGTCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCCGGCAGCAGG
ATTCGCACACATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCTGACTTGGCGAAT
GCCCACAAAAACTCACGCATAG
GTGTTTTCTATTGTGGATCCCCTACACTCACGAAACAACTCAAGGATCTTTCAAAAGAATTCAGCCAGACAACCACAACTAGATTCCACTTCCACAAG
GAAAACTTTTAA

Retrieve as FASTA