Entry information : NtRboh06a (NtRbohFa)
Entry ID 5574
Creation 2007-07-23 (Christophe Dunand)
Last sequence changes 2010-07-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-13 (Christophe Dunand)
Peroxidase information: NtRboh06a (NtRbohFa)
Name (synonym) NtRboh06a (NtRbohFa)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtRboh06a
start..stop
S start..stop
NbRboh01 1916 0 1..962 1..962
StRboh01 1803 0 1..962 1..963
LeRboh01 1801 0 1..962 1..963
PtRboh03 1617 0 1..962 1..948
Literature and cross-references NtRboh06a (NtRbohFa)
Literature Wohlgemuth H., Sandermann H., Langebartels C. Ozone sensitivity of the biomonitor plant, tobacco Bel W3, is based on activation of NADPH oxidase. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   Q8W4X7
mRNA ref. GenBank:   AJ320505.1
Protein sequence: NtRboh06a (NtRbohFa)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   962
PWM (Da):   %s   109188.59 Transmb domain:   %s   o399-418i538-560o580-602i759-776o
PI (pH):   %s   9.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRGLPGHERR WTSDTVSSDK DFSGELSPGA DSGYNSGFAS EEFVEVTLDL QDDDTIILRS VEPATVINID APDLPAGVGI SGVSIETPTS ASVSESRSPT IRRSSSSKLR QFSQELKAEA  VAKARQFSQE LKAELRRFSW SHGHASRAFS PSSFFQNAVV GTGNGVDSAL AARALRRQRA QLDRTRSSAH RALRRLKFIS NNKTNGWNEV ENNFSKLAKD GYLYRSDFAQ CIGMKDSKEF  ALELFDALSR RRRLKVDKIS KEELYEYWSQ ITDQSFDSRL QISFDMVDKN EDGRIAEEEV KEIIMLSASA NKLSRLKEQA EEYAALIMEE LDPERLGYIE LWQLETLLLQ KDTYLNYSQA  LSYTSQALSQ NLHGLRKKSP IKRMSTKLVY SLQENWKRIW VLTLWILIMI GLFLWKFYQY KNKSAFRVMG YCLVTAKGAA ETLKFNMALI LLPVCRNTIT WLRSTKLSHF VPFDDNINFH  KTVAAAIVTG IILHAGNHLV CDFPRLIHAD DQDYQSFLSN DFGQSKPGYI DLVKGVEGVT GIIMVILMAI AFTLATRWFR RSLIKLPKPF DRLTGFNAFW YSHHLLVIVY ILLIIHGTFL  FLVHKWYSKT TWMYLAVPVL LYAGERTLRF FRSGLYTVRL LKVAIYPGNV LTLQMSKPPQ FRYKSGQYMF VQCPAVSPFE WHPFSITSAP GDDYLSIHIR QLGDWTQELK RVFSEACERP  EAGKSGLLRA DENTKKSLPK LLIDGPYGAP AQDYRKYDVL LLVGLGIGAT PFISILKDLL VNIVKMEEQA DLASDFSGNS DMSVATSEQP ALNKISLKRR KSTLRTTNAY FYWVTREQGS  FDWFKGVMNE VAELDQRGVI EMHNYLTSVY EEGDARSALI TMVQALNHAK NGVDIVSGTR VRTHFARPNW KKVFSKTLTK HANARIGVFY CGAPVLAKEL SKLCKEYNQK GATKFEFHKE 
HF 

Retrieve as FASTA  
Remarks Complete sequence from mRNA. Cultivar="Bel W3".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGGGGTT TACCTGGGCA TGAACGCCGG TGGACATCCG ATACGGTATC TTCCGACAAG GATTTTAGTG GTGAATTATC GCCGGGAGCT GATTCCGGCT ATAATTCCGG TTTTGCTTCC  GAGGAGTTTG TTGAAGTCAC GCTTGATCTT CAGGATGATG ATACCATTAT TCTACGGAGC GTTGAACCGG CTACTGTGAT TAACATTGAC GCTCCTGATC TTCCCGCCGG AGTCGGTATT  TCCGGAGTTT CAATTGAAAC TCCGACGTCA GCATCGGTGT CGGAATCTCG ATCGCCGACG ATCCGCCGGA GTTCATCTAG TAAACTTCGT CAGTTTTCAC AGGAGTTGAA AGCTGAGGCG  GTTGCGAAAG CGAGGCAGTT TTCACAAGAG CTGAAGGCGG AGTTAAGGAG ATTCTCATGG AGCCATGGGC ATGCGTCTCG CGCGTTTTCG CCCTCGTCGT TTTTTCAAAA CGCCGTCGTT  GGAACAGGTA ACGGCGTGGA CTCGGCTTTA GCGGCACGTG CATTACGTCG GCAACGCGCG CAGCTTGATC GGACTCGTTC CAGCGCCCAT AGAGCTCTTC GTAGACTCAA ATTCATTAGC  AATAACAAAA CCAATGGATG GAATGAAGTT GAAAACAATT TCTCAAAGCT CGCTAAAGAC GGTTATCTTT ACCGTTCCGA TTTCGCACAA TGCATAGGTA TGAAGGATTC GAAGGAATTT  GCATTGGAAT TATTTGATGC TTTGAGTAGA AGAAGAAGAT TAAAGGTTGA TAAAATTAGC AAGGAGGAAT TGTATGAGTA CTGGTCTCAA ATCACCGATC AGAGTTTCGA TTCTCGGCTT  CAGATCTCCT TCGACATGGT GGACAAGAAT GAAGATGGTC GAATTGCTGA AGAGGAAGTA AAAGAGATCA TCATGCTAAG TGCATCTGCA AACAAGTTAT CAAGATTAAA AGAACAAGCA  GAGGAGTATG CAGCTTTAAT CATGGAAGAA TTAGATCCTG AAAGACTCGG CTACATTGAG CTATGGCAGC TGGAAACACT TCTCCTCCAA AAGGACACTT ACCTCAACTA CAGTCAAGCA  CTAAGTTACA CGAGCCAAGC CTTGAGCCAA AACCTTCACG GATTAAGGAA GAAAAGCCCA ATAAAAAGAA TGAGCACAAA ACTTGTCTAT TCATTGCAAG AAAACTGGAA GAGAATTTGG  GTTCTCACTT TATGGATTTT GATAATGATT GGGCTTTTTC TTTGGAAGTT CTATCAGTAC AAAAACAAGA GTGCATTCCG TGTCATGGGT TATTGCCTTG TCACGGCTAA GGGCGCTGCT  GAGACTCTCA AGTTCAACAT GGCTCTTATA TTATTGCCAG TATGCAGAAA CACTATTACA TGGCTCAGGT CCACCAAGTT GAGCCATTTT GTACCCTTTG ACGACAACAT CAACTTTCAC  AAGACTGTCG CTGCAGCCAT TGTCACTGGT ATCATACTCC ATGCTGGTAA CCATCTTGTA TGTGATTTCC CAAGGCTTAT ACATGCAGAT GATCAAGATT ATCAAAGTTT TTTGTCGAAT  GATTTTGGCC AAAGTAAGCC TGGATACATA GACCTTGTTA AAGGAGTTGA GGGTGTGACG GGAATAATAA TGGTAATCCT TATGGCCATT GCTTTCACTC TTGCTACACG ATGGTTTAGA  CGGAGCCTCA TTAAGTTGCC CAAACCTTTT GATAGACTCA CTGGCTTCAA TGCATTCTGG TATTCACACC ACCTTCTTGT CATTGTCTAC ATCCTACTGA TCATCCATGG CACGTTCCTC  TTCCTTGTGC ATAAATGGTA CTCCAAGACG ACGTGGATGT ATCTAGCAGT TCCTGTGCTT CTCTACGCAG GGGAAAGAAC TCTTAGATTC TTCCGGTCAG GCTTGTACAC TGTCCGGCTT  CTGAAAGTAG CAATATATCC TGGAAATGTC CTCACTCTAC AAATGTCTAA GCCTCCTCAA TTTCGATACA AAAGTGGACA ATATATGTTT GTCCAGTGTC CAGCTGTTTC TCCATTCGAG  TGGCATCCAT TTTCCATTAC TTCAGCTCCT GGGGATGACT ACTTGAGCAT TCACATCCGG CAACTTGGTG ACTGGACTCA AGAACTCAAG CGGGTCTTTT CTGAGGCTTG CGAGCGGCCA  GAGGCTGGAA AGAGTGGCCT GCTCAGAGCT GACGAAAACA CTAAGAAAAG TTTGCCAAAG CTATTAATAG ATGGACCTTA CGGAGCTCCA GCACAAGATT ACCGAAAATA TGATGTCTTG  CTGCTTGTTG GTCTTGGCAT TGGAGCAACG CCGTTCATAA GTATCCTGAA AGACTTGCTC GTTAACATCG TGAAAATGGA GGAGCAAGCA GATTTAGCCT CAGATTTCAG TGGGAACTCA  GACATGAGCG TTGCGACAAG TGAACAACCA GCTCTCAACA AGATTTCTCT GAAAAGGAGA AAGAGCACTC TAAGAACCAC AAATGCATAT TTTTATTGGG TGACCCGGGA GCAAGGATCA  TTTGATTGGT TCAAAGGCGT TATGAACGAA GTGGCTGAAC TTGATCAAAG GGGGGTCATC GAGATGCATA ACTACTTGAC GAGTGTTTAT GAGGAAGGGG ATGCTCGTTC AGCTCTCATT  ACCATGGTCC AGGCACTTAA CCATGCTAAG AATGGGGTTG ATATTGTATC AGGCACCAGG GTGAGGACAC ATTTTGCTAG GCCAAATTGG AAGAAAGTAT TTTCCAAGAC CTTAACCAAG  CATGCAAATG CAAGAATAGG GGTTTTCTAC TGTGGTGCAC CCGTATTAGC AAAAGAACTC AGCAAACTCT GCAAAGAGTA TAATCAAAAG GGTGCAACAA AGTTCGAGTT TCACAAAGAA 
CATTTTTAG 

Retrieve as FASTA