Entry information : RnoGPx07
Entry ID 5600
Creation 2007-07-25 (Christophe Dunand)
Last sequence changes 2007-07-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-04 (Gregory Theiler)
Peroxidase information: RnoGPx07
Name RnoGPx07
Class Animal glutathione peroxidase    [Orthogroup: Gpx1005]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation N/D
Tissue types Adipose tissue
Embryonic tissue
Genitourinary
Heart
Lung
Placenta
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoGPx07
start..stop
S start..stop
MmGPx07 373 1e-134 1..185 1..186
SscGPx07 328 3e-117 18..185 19..186
PtroGPx07 326 3e-116 18..185 20..187
HsGPx07 326 3e-116 18..185 20..187
Literature and cross-references RnoGPx07
Literature Lee,N.H., Glodek,A., Chandra,I., Mason,T.M., Quackenbush,J., Kerlavage,A.R. and Adams,M.D. Rat Genome Project: Generation of a Rat EST (REST) Catalog & Rat Gene Index.
DNA ref. GenBank:   AAHX01039029.1| (1134..8483)
Cluster/Prediction ref. GenBank:   XM_216473 UniGene:   Rn.4130
Protein sequence: RnoGPx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185 (166)
PWM (Da):   %s   20889.62 (18932.6)  
PI (pH):   %s   8.79 (9.03) Peptide Signal:   %s   cut: 20 range:20-185
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVAAVATAWL LLWAAACQSE QDFYDFKAVN IRGKLVSLEK YRGSVSLVVN VASECGFTDQ NYRALQQLQR DLGPYHFNVL AFPCNQFGQQ EPDSNREIEN FARRTYSVSF PMFSKIAVTG 
TGAHPAFKYL TRTSGKEPTW NFWKYLVAPD GKVVGAWDPT VPVEEIKPRI TEQVMKLILQ KREDL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 2 introns), 1 mRNA and 28 ESTs.