Entry information : TcrGPx01
Entry ID 5659
Creation 2007-08-08 (Christophe Dunand)
Last sequence changes 2012-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-19 (Christophe Dunand)
Peroxidase information: TcrGPx01
Name TcrGPx01
Class Other glutathione peroxidase    [Orthogroup: Gpx4001]
Taxonomy Eukaryota Trypanosomatidae Trypanosoma
Organism Trypanosoma cruzi    [TaxId: 5693 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcrGPx01
start..stop
S start..stop
TcrGPx02 314 6e-112 1..160 13..172
TcrGPx03 280 2e-98 2..160 11..169
TbrGPx02 272 2e-95 2..164 5..167
TbrGPx03 269 3e-94 2..163 13..174
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22242..22736 495  
join(22242..22736)


exon

Literature and cross-references TcrGPx01
Literature El-Sayed,N.M., et al., Comparative genomics of trypanosomatid parasitic protozoa. Science 309 (5733), 404-409 (2005).
Protein ref. GenPept:   EAN90955 UniProtKB:   Q4DEJ6
DNA ref. GenBank:   AAHK01000570 (22242..22736)
EST ref. GenBank:   CF889014
Protein sequence: TcrGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   164
PWM (Da):   %s   18166.19  
PI (pH):   %s   8.05
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTTVYDFQVN AADGKPYDLS QHKGHPLLIY NVASRCGYTK GGYETAATLY NKYKGQGFTV LAFPCNQFAG QEPGTAVEVK EYACTRFKAD FPIMEKIDVN GDKAHPLYEF MKSLKPGILG 
TKAIKWNFTS FLIDRHGVPV ERFSPGASVE EIEKKLLPIL NESN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 1 EST. Strain="CL Brener".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGACCG TTTACGACTT TCAGGTGAAC GCAGCCGATG GAAAGCCGTA TGATCTCTCG CAGCACAAGG GACATCCGCT GCTGATCTAC AATGTGGCGA GTAGGTGTGG CTACACGAAG  GGTGGCTACG AGACGGCCGC GACGCTCTAC AACAAGTACA AGGGCCAGGG CTTTACTGTT CTGGCGTTCC CGTGTAACCA ATTTGCCGGG CAGGAGCCGG GGACGGCGGT GGAGGTGAAG  GAATATGCCT GCACGCGGTT TAAGGCGGAC TTCCCCATCA TGGAAAAGAT TGACGTGAAT GGCGACAAGG CACATCCGCT GTATGAGTTT ATGAAGTCTT TGAAGCCCGG CATTCTTGGC  ACTAAAGCCA TCAAGTGGAA CTTTACTTCG TTCCTTATTG ACAGGCATGG TGTTCCCGTG GAGCGTTTTT CGCCTGGTGC ATCTGTGGAA GAGATTGAGA AAAAACTTTT GCCAATTTTG 
AATGAGAGCA ACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGACCG TTTACGACTT TCAGGTGAAC GCAGCCGATG GAAAGCCGTA TGATCTCTCG CAGCACAAGG GACATCCGCT GCTGATCTAC AATGTGGCGA GTAGGTGTGG CTACACGAAG  GGTGGCTACG AGACGGCCGC GACGCTCTAC AACAAGTACA AGGGCCAGGG CTTTACTGTT CTGGCGTTCC CGTGTAACCA ATTTGCCGGG CAGGAGCCGG GGACGGCGGT GGAGGTGAAG  GAATATGCCT GCACGCGGTT TAAGGCGGAC TTCCCCATCA TGGAAAAGAT TGACGTGAAT GGCGACAAGG CACATCCGCT GTATGAGTTT ATGAAGTCTT TGAAGCCCGG CATTCTTGGC  ACTAAAGCCA TCAAGTGGAA CTTTACTTCG TTCCTTATTG ACAGGCATGG TGTTCCCGTG GAGCGTTTTT CGCCTGGTGC ATCTGTGGAA GAGATTGAGA AAAAACTTTT GCCAATTTTG 
AATGAGAGCA ACTGA 

Retrieve as FASTA