Entry information : NtGPx08-1A (NtGPx08a)
Entry ID 5710
Creation 2007-08-14 (Christophe Dunand)
Last sequence changes 2011-04-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtGPx08-1A (NtGPx08a)
Name (synonym) NtGPx08-1A (NtGPx08a)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2004]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtGPx08-1A
start..stop
S start..stop
LeGPx08 319 4e-114 1..170 1..170
StGPx08 317 3e-113 1..170 1..170
PtGPx08 310 2e-110 1..169 1..169
NtGPx08-1B 308 6e-110 14..170 1..157
Literature and cross-references NtGPx08-1A (NtGPx08a)
Literature Coates,S.A., Dorlhac de Borne,F., Ross,J., Verrier,J.L., Ward,M. and Delon,R. A comprehensive survey of the N. tabacum transcriptome.
EST ref. GenBank:   EB444048
Protein sequence: NtGPx08-1A (NtGPx08a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170
PWM (Da):   %s   19163.62  
PI (pH):   %s   4.64
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASQSEKKPE SVFDFTVKDS KGNDIDLSSY KGKVLLIVNV ASKCGMTNSN YAELNQLYEK YKDQGLEILA FPCNQFGEEE PGSNDQILDF VCTRFKSEFP IFDKIEVNGE NASPLYKLLK 
SGKWGIFGDD IQWNFAKFLV DKNGQAADRY YPTTSPLTIE RDIKKLLEIV 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs (AM833685.1, FS435484.1, EB444048.1). Cultivar="K326" and "SNN".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GACATTTCCT AAGTTAATGG GTCAATGCCT GGTTGGATAT TTTGTGTTTT GGGGTGTTGA TTTCAGACTT CGGTACCTGA AGCCAAATTC TCATATCAAC AATGGCCAGC CAATCAGAGA  AGAAACCAGA ATCTGTTTTT GACTTCACTG TAAAGGATTC AAAGGGAAAT GATATAGATC TTAGTAGCTA CAAAGGAAAG GTCCTACTTA TCGTGAATGT TGCTTCCAAG TGCGGGATGA  CTAACTCAAA CTACGCAGAA CTCAACCAAT TATATGAGAA GTACAAAGAT CAAGGCCTGG AAATATTGGC ATTTCCTTGC AATCAATTTG GCGAGGAAGA ACCAGGGAGC AATGATCAGA  TCTTAGACTT CGTTTGTACA CGTTTCAAGT CAGAGTTCCC TATATTTGAC AAGATTGAAG TGAATGGCGA AAATGCATCT CCTCTTTATA AGTTGTTGAA ATCGGGAAAG TGGGGAATAT  TTGGGGATGA TATTCAGTGG AATTTTGCTA AGTTCCTGGT TGATAAGAAT GGACAGGCTG CTGATCGCTA TTATCCTACC ACCTCTCCTC TGACAATTGA GAGGGATATT AAAAAGCTGC  TGGAAATCGT GTAGTCGCCA GGGTTGAGCT TTCGACGATG TGGATCAATT TTTGACTTGT TAATGCTGGC TTAGGAGTTT GTCCCTTATT ATCATTTGGT TATCTGATAA CAGAACTTGT 
ATGTTCTTTT GGAGAAGTTT TAAACTGACT TTT 

Retrieve as FASTA