Entry information : StGPx05
Entry ID 5726
Creation 2007-08-15 (Christophe Dunand)
Last sequence changes 2007-08-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-04 (Gregory Theiler)
Peroxidase information: StGPx05
Name StGPx05
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Solanum tuberosum (Potato)    [TaxId: 4113 ]
Cellular localisation N/D
Tissue type Tubers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value StGPx05
start..stop
S start..stop
LeGPx05 339 8e-122 1..170 1..170
NtGPx04-1B 316 8e-113 1..170 1..170
NtGPx05-1A 308 1e-109 1..169 1..169
NtGPx05-1B 306 6e-109 1..169 1..169
Literature and cross-references StGPx05
Literature Flinn,B., Rothwell,C., Sardana,R., Griffiths,R., Lague,M., De Koeyer,D., Audy,P., Goyer,C., Li,X-Q., Wang-Pruski,G. and Regan,S. Generation of ESTs from a normalized developing potato tuber.
Cluster/Prediction ref. UniGene:   Stu.6969   Stu.6967 [Sequencing error]
Protein sequence: StGPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170
PWM (Da):   %s   18869.79  
PI (pH):   %s   10.03
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGASKSVPQK SIHEFTVKDS KGKNVDLSIY KGKVLLVVNV ASKCGFTSTN YTQLTQLYNE YKDKGFEVLA FPCNQFLKQE PGTSEQAQEF ACTRFSAEYP IFQKVRVNGP NEAPVYTFLK 
ASKGGFLSKS IKWNFTKFLV DKEGQVIRRY GSTTPPLSIK ADIQKALGEN 

Retrieve as FASTA  
Remarks Complete sequence from 8 ESTs + 8 ESTs (Unigene Stu.6967 with frame shift). Cultivar="Shepody". TC from TGI does not predict the start codon but found with CV497108.