Entry information : PstiGPx (GPX2)
Entry ID 5774
Creation 2007-08-30 (Christophe Dunand)
Last sequence changes 2011-12-15 (Passaia Gisèle)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: PstiGPx (GPX2)
Name (synonym) PstiGPx (GPX2)
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia
Organism Pichia stipitis    [TaxId: 4924 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PstiGPx
start..stop
S start..stop
CtanzGPx02 286 2e-101 1..160 1..160
MbicuGPx02 269 2e-94 4..160 3..159
CduGPx02 267 8e-94 1..160 1..160
ClusGPx01 267 1e-93 1..160 1..160
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 191021..191500 480  
join(191021..191500)


exon

Literature and cross-references PstiGPx (GPX2)
Literature Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Nat. Biotechnol. 25:319-326(2007).
Protein ref. GenPept:   ABN66664.1 UniProtKB:   A3LUW2
DNA ref. JGI genome:   chr_5.1 (191021..191500)
Protein sequence: PstiGPx (GPX2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   160
PWM (Da):   %s   17688.2  
PI (pH):   %s   8.45
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSKFYELTPK DAKGNDFPFV ELKGKVVVIV NVASKCGFTP QYKELEELNK KYEGKNVQII GFPCNQFGHQ EPGTADEIAS FCQLNYGVTF PVLAKVEVNG DNADPVYKFL KGEKSGVLGL 
TRIKWNFEKF LIDKNGKVVE RFSSLASPSS LGPKIDQLLK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron) 1 EST. Strain="ATCC 58785 / CBS 6054 / IFO 10063 / NRRL Y-11545".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAAAT TCTACGAGTT GACTCCTAAG GACGCCAAGG GCAACGACTT CCCCTTCGTG GAATTGAAGG GCAAGGTTGT CGTTATTGTC AACGTCGCTT CCAAGTGTGG CTTTACTCCT  CAGTACAAGG AGTTGGAAGA ATTGAACAAG AAATACGAAG GCAAGAACGT TCAAATCATC GGTTTCCCTT GCAACCAATT CGGCCACCAG GAACCAGGCA CTGCCGACGA GATCGCCAGC  TTCTGTCAAT TGAACTACGG AGTCACCTTC CCAGTGTTGG CCAAGGTCGA AGTCAACGGC GACAACGCCG ACCCAGTGTA CAAGTTCTTG AAGGGCGAGA AGTCCGGAGT TTTGGGCTTG  ACCAGAATCA AGTGGAACTT CGAGAAGTTC TTGATCGACA AAAACGGTAA GGTCGTTGAA AGATTCTCCT CTTTGGCTAG TCCATCCAGT CTTGGTCCAA AGATCGACCA GTTGTTGAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAAAT TCTACGAGTT GACTCCTAAG GACGCCAAGG GCAACGACTT CCCCTTCGTG GAATTGAAGG GCAAGGTTGT CGTTATTGTC AACGTCGCTT CCAAGTGTGG CTTTACTCCT  CAGTACAAGG AGTTGGAAGA ATTGAACAAG AAATACGAAG GCAAGAACGT TCAAATCATC GGTTTCCCTT GCAACCAATT CGGCCACCAG GAACCAGGCA CTGCCGACGA GATCGCCAGC  TTCTGTCAAT TGAACTACGG AGTCACCTTC CCAGTGTTGG CCAAGGTCGA AGTCAACGGC GACAACGCCG ACCCAGTGTA CAAGTTCTTG AAGGGCGAGA AGTCCGGAGT TTTGGGCTTG  ACCAGAATCA AGTGGAACTT CGAGAAGTTC TTGATCGACA AAAACGGTAA GGTCGTTGAA AGATTCTCCT CTTTGGCTAG TCCATCCAGT CTTGGTCCAA AGATCGACCA GTTGTTGAAG 

Retrieve as FASTA