Entry information : MdoPxd01
Entry ID 5814
Creation 2007-10-08 (Marcel Zamocky)
Last sequence changes 2007-10-08 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-09 (Christophe Dunand)
Peroxidase information: MdoPxd01
Name MdoPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Didelphidae Monodelphis
Organism Monodelphis domestica    [TaxId: 13616 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MdoPxd01
start..stop
S start..stop
RnoPxd01 2740 0 147..1620 6..1470
MmPxd01 2731 0 180..1623 31..1473
HsPxd01 2717 0 149..1624 11..1479
TguPxd01 2697 0 196..1627 1..1431
Literature and cross-references MdoPxd01
Literature Mikkelsen,T.S., et al., Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences.
Protein ref. GenBank:   XP_001381381
DNA ref. GenBank:   AAFR03004326 (46935..65705) [3' end]   AAFR03004327 (4103..76779) [Fragment]
mRNA ref. GenBank:   XM_001381344 (1..4884)
Protein sequence: MdoPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1627
PWM (Da):   %s   182065.77  
PI (pH):   %s   7.4
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSWNRYQQDM GRSNHGWQSR GSGGWNEHLH QGSGPMYIKG ACKNNGREGA RGGIGVYWPE ANDLNTSSTY SGRQTNQTAS LEAATRGIEQ AKVQNFDKVT VHSDNQLVTK GSDTSRRPSS  PPGRLHWIPT PPTTLSGSAM APFRASTPRS LLLLLLCWSA GVFVGVSPQL GSSSGGGGNG GCPSRCLCFR TTVRCMHLML ESVPSVSPQT SILDLRFNRI REIQPGTFKR LKNLNTLLLN  NNQIKRIPSG SFEDLENLKY LYLYKNEIQS IDRQAFKGLA SLEQLYLHFN QIETLDPESF NHLPKLERLF LHNNRIAHLV PGTFSHLNSM KRLRLDSNAL HCDCEILWLA DLLKTYAESG  NAQAAATCEY PRRIQGRSVA TITPEELNCE RPRITSEPQD VDVTSGNTVY FTCRAEGNPK PEIIWLRNNN ELSMKTDSRL NLLDDGTLMI QNTQETDQGI YQCMAKNVAG EVKTQEVTLR  YFGSPARPSF VIQPQNTEVL VGESVTLECS ATGHPLPRIT WTKGDRTPLP TDPRVNITPS GGLYIEKVIQ EDSGEYICFA ANNVDSIHAT AYIIVQAVPH FTVTPQDRVV IEGQTVDFQC  EAQGYPQPVI AWTKGGSQLS VDRRHLVLSS GTLRISSVAL HDQGQYECQA VNIIGSQRVA VHLTVQPRVT PVFASIPRDM TVEVGTNVQI PCSSQGEPEP VITWNKDGVQ VTESGKFHIN  PEGFLTINDV GPADEGRYEC VARNTIGYSS VSMVLSVNVP DVSRNGDPFV ATSIVEAIAT VDRAINSTRT HLFDSRPRSP NDLLALFRYP RDPYTVEQAR AGEIFERTLQ LIQEHVQHGL  MVDLNGTSYH YNDLVSPQYL SLIANLSGCT AHRRVNNCSD MCFHQKYRTH DGTCNNLQHP MWGASLTAFE RLLKSVYENG FNLPRGINPN RLYNGFPLPM PRLVSTTLIG TESITPDEQF  THMTMQWGQF LDHDLDSTVV ALSQARFSDG QHCSSVCTND PPCFSVMIPP NDPRVRNGAR CMFFVRSSPV CGSGMTSLLM NSVYPREQIN QLTSYIDASN VYGSSDHEAR EIRDLASHRG  LLRQGIVQRS GKPLLPFATG PPTECMRDEN ESPIPCFLAG DHRANEQLGL TSMHTLWFRE HNRIATELLK LNPHWDGDTI YYETRKIVGA EIQHITYNHW LPKIFGEVGM KMLGEYKGYD  PSVNSGIFNA FATAAFRFGH TLINPILYRL DENFEPIPQG HIPLHKAFFS PFRIVNEGGI DPLLRGLFGV AGKMRVPTQL LNTELTERLF SMAHTVALDL AAINIQRGRD HGIPPYHDFR  VYCNLSSAST FEDLRNEIKN PHIREKLQGL YGSPLNIDLF PALMVEDLVP GSRLGPTLMC LLSTQFKRLR DGDRLWYENP GVFSPAQLTQ IKQTSLARIL CDNSDNITHV QRDVFRVAEF  PHGYSSCDEI PKVDLRMWQD CCEDCRTRGQ FNVFSYHFRG RRSLEFSYQE DKPAKRTKAR KILSTVKQSQ PFNNFTSSSD EHMNVPATND FKEFVLEMQK TITGLRKQIK KLESRLSKTE 
CTDEKGKSYS SNEKWKRDSC TVCECKDGQI TCFVESCQPA DCPAPVKIKG ECCPVCLKNT VSKPKKP 

Retrieve as FASTA  
Remarks Complete sequence from from genomic (chromo 1) and mRNA. Peroxidase domain located in positions 885-1438.