Entry information : EcabPGHS01
Entry ID 5832
Creation 2007-10-09 (Marcel Zamocky)
Last sequence changes 2007-10-09 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-16 (Christophe Dunand)
Peroxidase information: EcabPGHS01
Name EcabPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Equidae Equus
Organism Equus caballus    [TaxId: 9796 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcabPGHS01
start..stop
S start..stop
HsPGHS01 1119 0 24..599 24..599
OarPGHS01 1114 0 21..599 22..600
PtroPGHS01 1111 0 27..599 2..574
BtPGHS01 1108 0 24..599 25..600
Literature and cross-references EcabPGHS01
Literature Lindblad-Toh,K., Wade,C.M., Di Palma,F., Gnerre,S. and Lander,E.S. The Genome Sequencing Platform, The Genome Assembly Team. The Genome Sequence of Equus caballus (horse), Assembly Version 2.0.
Protein ref. GenBank:   XP_001501456.1
DNA ref. GenBank:   AAWR02025670.1 (29990..50312)
mRNA ref. GenBank:   XM_001501406
Protein sequence: EcabPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   599 (576)
PWM (Da):   %s   68849.79 (66129.2)  
PI (pH):   %s   7.88 (7.59) Peptide Signal:   %s   cut: 24 range:24-599
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSRQSLWLRF PLFLLLLPSL VLPADPRAPA LVNPCCYYPC QHKGICVRFG LDHYQCDCTR TGYSGPNCTI PELWTWLRNS LRPSPSFLHF LLTHGRWFWE FVNATFIRDM LMRLVLTVRS  NLIPSPPTYN VAHDYISWES FSNVSYYTRV LPSVPQDCPT PMGTKGKKQL PDAQLLSDRF LLRRKFIPDP QGTNLMFAFF AQHFTHQFFK TSGKMGPGFT KALGHGVDLG HIYGDNLERQ  YHLRLFKDGK LKYQMLNGEM YPPTVEQAPV LMHYPRGIPP QNQMAVGQEV FGLLPGLMLY ATLWLREHNR VCDLLKTEHP TWDDEQLFQT ARLILIGETI KIVIEEYVQQ LSGYFLQLKF  DPELLFGVHF QYRNRIAMEF NHLYHWHPLM PDSFRVGSQE YSYKQFLFNT SMLVDYGVEA LVDAFSRQIA GRIGGGRNLD HHVLHVAVDV IKESRELRLQ PFNEYRKRFG MKPYASFQEL 
TGEKEMAAEL EELYGDIDAL EFYPGLLLEK CHPNSIFGES MIEIGAPFSL KGLLGNPICS PEYWKPSTFG GEMGFNIVKT ATLKKLVCLN TNTCPYVSFR VPKRPQDDGP GVERPSTEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 25, 9 introns). No EST. Breed="thoroughbred"