Entry information : MdoPGHS01
Entry ID 5834
Creation 2007-10-09 (Marcel Zamocky)
Last sequence changes 2007-10-09 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-25 (Christophe Dunand)
Peroxidase information: MdoPGHS01
Name MdoPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Didelphidae Monodelphis
Organism Monodelphis domestica    [TaxId: 13616 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MdoPGHS01
start..stop
S start..stop
BtPGHS01 993 0 59..625 33..600
OarPGHS01 992 0 59..625 33..600
EcabPGHS01 988 0 59..625 32..599
HsPGHS01 979 0 59..625 32..599
Literature and cross-references MdoPGHS01
Literature Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team. Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences. Nature 447 (7141), 167-177 (2007)
Protein ref. GenBank:   XP_001370514.1
DNA ref. GenBank:   AAFR03041308 (140572..156557)
mRNA ref. GenBank:   XM_001370477
Protein sequence: MdoPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   625
PWM (Da):   %s   71605.23 Transmb domain:   %s   o20-37i46-68o
PI (pH):   %s   7.56
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVSVLVASE YRTLQDTDIS GHSVAILGGV SVIVALVQRR EHGRDMLWAL CVFWGLVTVN PCCYFPCQHK GVCVRFGLDQ YQCDCTRTGY YGPKCTTPEL WTRIREALRP SPSFYHFILT  HGRWIWNIIN TTFIRDVLMR LVLTVRANLI PSPPTYNSYH GFISWESYAN LSFYTRVLAP VPEDCPTPMG VKGKKELPDP ELLARRFLLR KEFVPDPQGT NLMFAFFAQH FTHQFFKTSG  KMGPAFTKAL GHGVDLGHIY GDNLQRQYQL RLFKDGKLKF QMVDGEMYPP SVTETQASMR YPANVPESQQ MAVGQEVFGL LPGLMMYATI WLREHNRVCD ILRAEHPTWK DEQLFQTARL  ILIGETIRIV IEEYVQHLSG YFLKLKFDPE MLFGIQFQYQ NRISLEFNHL YHWHPLMPDS FVVGDQEYSY EQFVFNTSML LDYGVEALVD AFSRQRAGKI GGAKNINHHI LHVAISTIKE  SRELRLQSFN EYRKRFGMKP YTSFQELTEK QKSAELEELY GDIDALEFFP GLLIEKSLPN SIFGESMVEI GAPFSLKGLL GNPICSPEYW KPSTFGGETG FNLVKTATLQ KLVCLNVKMC 
PYVSFRVPDP DQVDKQSVKR PSTEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 10 introns). No EST available.