Entry information : MdoPGHS02
Entry ID 5835
Creation 2007-10-09 (Marcel Zamocky)
Last sequence changes 2007-10-09 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-25 (Christophe Dunand)
Peroxidase information: MdoPGHS02
Name MdoPGHS02
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Didelphidae Monodelphis
Organism Monodelphis domestica    [TaxId: 13616 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MdoPGHS02
start..stop
S start..stop
MdoPGHS01 949 0 176..727 59..609
EcabPGHS01 873 0 176..727 32..583
HsPGHS01 867 0 174..728 30..584
BtPGHS01 867 0 176..727 33..584
Literature and cross-references MdoPGHS02
Literature Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team. Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences. Nature 447 (7141), 167-177 (2007)
Protein ref. GenBank:   XP_001370595.1
DNA ref. GenBank:   AAFR03041310 (34121..83160)
mRNA ref. GenBank:   XM_001370558
Protein sequence: MdoPGHS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   729
PWM (Da):   %s   82724.1 Transmb domain:   %s   i5-27o
PI (pH):   %s   8.56
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGWWFCIPRL HNGILLVICM MVALWMGKHR QGLLLDRVPG GVAHKRPGNK LPPDVLPYAT HCPELLHCPC ALVQLESVEA AGQAFTTLQE DPRGFRVVRL VKKGHHQNGP GVEGGSIPLA  PCASLEAQEP KTSFSPNLLG PLPTVTHSWS WGPNFVPPLP RLDVSNLPHG PDGTRVNPCC YYPCQNKGIC IHFELDQYHC DCTRTGYYGP NCTTPLLWTK ISKHLYPSHS FVHFLLTHAS  WIWKLINATF LRDVLMRLII TSRTNLIPSP HIYNSYHNYM NWESYSNLSY YSRVLPPVPE DCPTPMGVKG KKQLPDPEVL VTNFLIRKKF VPDPQGTNLM FAFFAQHFTH QFFKTSLKLG  SAFTSALGHG VDLSNVYGDN LKRQYQLRLF KDGKLKFQMV DGEMYPPSVA ETQASMNYPP TVPKVYQMAV GNEQFGLLPG LMMYATLWLR EHNRVCDILK SEHPTWKDEQ LFQTARLILI  GETIKIVIEE YVQHLSGYYL KLKFDPEMLF GVPFQYQNRI SLEFNHLYHW HPLIPDVFVV GDKEYNYKQF VFNTSMLLDY GVETLVNDFS SQRAGKIAGI NNVNHNLRTV AENTIRVSRR  LKFQSFNEYR KRFGLKPYTS FQELTGENEK SAELEKLYGD IDAVEFYPGL LLEKSLPNSS LGESIVNIGS SFSLKGLLSN PICSPEYWKP STFGGQVGFN LVKTATLQKL VCLNVKKCPY 
VSFRVPEGK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 10 introns). No EST available.