Entry information : ShiPGHS02 (COX2)
Entry ID 5840
Creation 2007-10-09 (Marcel Zamocky)
Last sequence changes 2007-10-09 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-26 (Christophe Dunand)
Peroxidase information: ShiPGHS02 (COX2)
Name (synonym) ShiPGHS02 (COX2)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Cricetidae Sigmodon
Organism Sigmodon hispidus (hispid cotton rat)    [TaxId: 42415 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ShiPGHS02
start..stop
S start..stop
RnoPGHS02-A 1194 0 1..604 1..604
CfaPGHS02 1162 0 1..604 1..604
OcuPGHS02 1155 0 15..604 15..604
EcabPGHS02 1139 0 15..604 15..604
Literature and cross-references ShiPGHS02 (COX2)
Literature Richardson J.Y., Ottolini M.G., Pletneva L., Boukhvalova M., Zhang S., Vogel S.N., Prince G.A., Blanco J.C. Respiratory syncytial virus (RSV) infection induces cyclooxygenase 2: a potential target for RSV therapy. J. Immunol. 174:4356-4364(2005).
Protein ref. GenBank:   AAL55393.1 UniProtKB:   Q8VH41
mRNA ref. GenBank:   AY065644
Protein sequence: ShiPGHS02 (COX2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   604 (587)
PWM (Da):   %s   68926.79 (67145.8)  
PI (pH):   %s   7.44 (7.29) Peptide Signal:   %s   cut: 18 range:18-604
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLFRAVLLCA ALALSHAANP CCSNPCQNRG ECMTVGFDQY KCDCTRTGFY GENCTIPEFL TRIKLLLKPT PNTVHYILTH FKGVWNIVNN IPFLRSSIMR YVLTSRSHLI DSPPTYNVHY  GYKSWEAFSN LSYYTRALPP VGDDCPTPMG VKGNKELPDS KEVLEKVLLR RKFIPDPQGT NIMFAFFAQH FTHQFFKTDQ KRGPGFTRGL GHGVDLNHIY GETLDRQHKL RLFKDGKLKY  QVIDGEVYPP TVKDTQVEMI YPPHIPEHLR FAVGQEVFGL VPGLMMYATI WLREHNRVCD VLKQEHPEWD DERLFQTSRL ILIGETIKIV IEDYVQHLSG YHFKLKFDPE LLFNQQFQYQ  NRIAAEFNTL YHWHPLLPDT FQIEDQEYNF KQFLYNNSIL IEHGLTHFVE SFTRQSAGRV AGGRNVPVAV KAVAKASIDQ SREMKYQSLN EYRKRFSLKP YTSFEELTGE KEMAAELEAL  YNDIDAMELY PALLVEKPRP DAIFGETMVE LGAPFSLKGL MGNPICSPQY WKPSTFGGQV GFEIINTASI QSLICNNVKG CPFTSFNVQD PQPTKTATIN ASASHSRLDD INPTVLIKGR 
STEL 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.