Entry information : SboDyPrx01 (ycdB)
Entry ID 5871
Creation 2007-10-19 (Christophe Dunand)
Last sequence changes 2007-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-22 (Christophe Dunand)
Peroxidase information: SboDyPrx01 (ycdB)
Name (synonym) SboDyPrx01 (ycdB)
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Enterobacteriaceae Shigella
Organism Shigella boydii    [TaxId: 621 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SboDyPrx01
start..stop
S start..stop
EcoDyPrx01_K12 873 0 1..423 1..423
SsoDyPrx01 870 0 1..423 1..423
EcoDyPrx01_UTI89 867 0 1..423 1..423
EcoDyPrx01_APECO1 864 0 1..423 1..423
Literature and cross-references SboDyPrx01 (ycdB)
Literature Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J., Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery. Nucleic Acids Res. 33:6445-6458(2005).
Protein ref. UniProtKB:   Q31Z86
DNA ref. GenBank:   CP000036 (2006069..2007340)
Protein sequence: SboDyPrx01 (ycdB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   423
PWM (Da):   %s   46607.86  
PI (pH):   %s   6.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQYKDENGVN EPSRRRLLKV IGALALAGSC PVAHAQKTQS APGTLSPDAR NEKQPFYGEH QAGILTPQQA AMMLVAFDVL ASDKADLERL FRLLTQRFAF LTQGGAAPET PNPRLPPLDS  GILGGYIAPD NLTITLSVGH SLFDERFGLA PQMPKKLQKM TRFPNDSLDA ALCHGDVLLQ ICANTQDTVI HALRDIIKHT PDLLSVRWKR EGFISDHAAR SKGKETPINL LGFKDGTANP  DSQNDKLMQK VVWVTADQQE PAWTIGGSYQ AVRLIQFRVE FWDRTPLKEQ QTIFGRDKQT GAPLGMQHEH DVPDYASDPE GKVIALDSHI RLANPRTAES ESSLMLRRGY SYSLGVTNSG 
QLDMGLLFVC YQHDLEKGFL TVQKRLNGEA LEEYVKPIGG GYFFSLPGVK DANDYLGSAL LRV 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Serotype="4".