Entry information : SflDyPrx01 (ycdB)
Entry ID 5873
Creation 2007-10-19 (Christophe Dunand)
Last sequence changes 2007-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-22 (Christophe Dunand)
Peroxidase information: SflDyPrx01 (ycdB)
Name (synonym) SflDyPrx01 (ycdB)
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Enterobacteriaceae Shigella
Organism Shigella flexneri    [TaxId: 623 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SflDyPrx01
start..stop
S start..stop
SsoDyPrx01 856 0 1..421 1..423
SboDyPrx01 856 0 1..421 1..423
EcoDyPrx01_K12 854 0 1..421 1..423
EcoDyPrx01_UTI89 853 0 1..421 1..423
Literature and cross-references SflDyPrx01 (ycdB)
Literature Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q.;
"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a.";
BMC Genomics 7:173-173(2006).
Protein ref. UniProtKB:   Q0T616   Q83LK4 [Other strain]
DNA ref. GenBank:   CP000266 (1075324..1076589)
Protein sequence: SflDyPrx01 (ycdB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   421
PWM (Da):   %s   46409.66  
PI (pH):   %s   6.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQYKDENGVN EPSRRRLLKG IGALAGSCPV AHAQKTQSAP GTLSPDARNE KQPFYGEHQA GILTPQQAAM MLVAFDVLAS DKADLERLFR LLTQRFAFLS QGGAAPETPN PRLPPLDSGI  LGGYIAPDNL TITLSVGHSL FDERFGLAPQ MPKKLQKMTR FPNDSLDAAL CHGDVLLQIC ANTQDTVNHA LRDIIKHTPD LLSVRWKREG FISDHAARSK GKETPINLLG FKDGTANPDS  QNDKLMQKVV WVTADQQEPA WTIGGSYQAV RLIQFRVEFW DRTPLKEQQT IFGRDKQTGA PLGMQHEHDV PDYASDPEGK VIALDSHIRL ANPRTAESES SLMLRRGYSY SLGVTNSGQL 
DMGLLFVCYQ HDLEKGFLTV QKRLNGEALE EYVKPIGGGY FFSLPGVKDA NDYLGRALLQ V 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="8401", Serovar="5b" and Strain="301", Serotype="2a".