Entry information : YpDyPrx01 (ycdB)
Entry ID 5876
Creation 2007-10-22 (Christophe Dunand)
Last sequence changes 2007-10-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-22 (Christophe Dunand)
Peroxidase information: YpDyPrx01 (ycdB)
Name (synonym) YpDyPrx01 (ycdB)
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Enterobacteriaceae Yersinia
Organism Yersinia pestis    [TaxId: 632 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value YpDyPrx01
start..stop
S start..stop
YpsDyPrx01_IP32953 899 0 1..434 1..434
SflDyPrx01 629 0 12..433 3..420
SboDyPrx01 629 0 12..432 3..421
SsoDyPrx01 628 0 12..432 3..421
Literature and cross-references YpDyPrx01 (ycdB)
Literature Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L. Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen. J. Bacteriol. 188:4453-4463(2006).
Protein ref. UniProtKB:   Q7CI09   Q1CHD5 [Other strain]
DNA ref. GenBank:   CP000305 (2547608..2548912)
Other ref. UniProtKB:   Q7CI09
Protein sequence: YpDyPrx01 (ycdB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   434
PWM (Da):   %s   47699.4  
PI (pH):   %s   8.31
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRDKTGPKFG PYQPDDEAVS PSRRRLILGM GMVSGALVLG GAKTAQAADC RSPDVAGTQD ERWQKQPFYG QHQAGVLTPQ QAAMMLVAFD VLATDKTSLI RLFKLLTERL AFLTTGGRAP  SVNAKLPPLD SGIMGPEIYP DNLTVTVSVG NALFDERFGL QGQKPLRLQR MTRFPNDSLD AGLCHGDVML QICANTNETV IHALRDIIKH TPDLLSVRWK REGFISAHAA RSKGQDTPIN  LLGFKDGTAN PKISNKPLIN NVVWVSNNAG EPAWAVGGSY QVVRIIRFKV EFWDRTPLQE QQTIFGRDKN SGAPLGMQHE HDEPNYAKDP EGKVIPMDAH IRLANPRTIE TQRNLMLRRG 
YSYSLGVSNS GQLDMGLLFV CYQSDLAQAF LTVQERLNGE ALEEYVKPIG GGYFFTLPGV ADANHYLAQS LLEA 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="Nepal516", strain="CO92/biovar Orientalis", strain="91001/Biovar Mediaevalis" and strain="KIM5/Biovar Mediaevalis".