Entry information : EcoDyPrx01_APECO1 (ycdB) )
Entry ID 5878
Creation 2007-10-22 (Christophe Dunand)
Last sequence changes 2007-10-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-22 (Christophe Dunand)
Peroxidase information: EcoDyPrx01_APECO1 (ycdB) )
Name (synonym) EcoDyPrx01_APECO1 (ycdB) )
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Enterobacteriaceae Escherichia
Organism Escherichia coli    [TaxId: 562 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcoDyPrx01_APECO1
start..stop
S start..stop
EcoDyPrx01_UTI89 872 0 1..423 1..423
EcoDyPrx01_536 869 0 1..423 1..423
SsoDyPrx01 865 0 1..423 1..423
SboDyPrx01 864 0 1..423 1..423
Literature and cross-references EcoDyPrx01_APECO1 (ycdB) )
Literature Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K. The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. J. Bacteriol. 189:3228-3236(2007).
Protein ref. UniProtKB:   A1A9S3
DNA ref. GenBank:   CP000468 (1068942..1070213)
Protein sequence: EcoDyPrx01_APECO1 (ycdB) )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   423
PWM (Da):   %s   46525.77  
PI (pH):   %s   6.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQYEDENGVN EPSRRRLLKG IGALALAGSC PVAHAQKTQS APGTLSPDAR NEKQPFYGEH QAGILTPQQA AMMLVAFDVL ASDKADLERL FRLLTQRFAF LTQGGAAPET PNPRLPPLDS  GILGGYIAPD NLTITLSVGH SLFDERFGLA PQMPKKLQKM TRFPNDSLDA ALCHGDVLLQ ICANTQDTVI HALRDIIKHT PDLLSVRWKR EGFISDHAAR SKGKETPINL LGFKDGTANP  DSQNDKLMQK VVWVTADQQE PAWTIGGSYQ AVRLIQFRVE FWDRTPLKEQ QTIFGRDKQT GAPLGMLHEH DVPDYASDPE GKVIALDSHI RLANPRTAES ESSLMLRRGY SYSLGVTNSG 
QLDMGLLFVC YQHDLEKGFL TVQKRLNGEA LEEYVKPIGG GYFFALSGVK DANDYLGSAL LRV 

Retrieve as FASTA  
Remarks Complete sequence from genomic. strain="APEC O1", serovar="O1:K1"