Entry information : PtaPrx56
Entry ID 5942
Creation 2007-11-02 (Christophe Dunand)
Last sequence changes 2007-11-02 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-31 (Qiang Li)
Peroxidase information: PtaPrx56
Name PtaPrx56
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx56
start..stop
S start..stop
PabPrx92 447 4e-160 1..286 13..297
PabPrx218 428 2e-152 2..285 10..291
MePrx88 357 2e-124 4..285 3..283
EcamPrx176 349 1e-121 1..285 6..289
Literature and cross-references PtaPrx56
Literature Pratt,L., Cordonnier-Pratt,M.M., Lorenz,W.W., Zimmermann,C. and Dean,J.F.D. An EST database from iron-deficient loblolly pine (Pinus taeda) roots.
EST ref. GenBank:   DR164099 [5' end]
Protein sequence: PtaPrx56
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   286 (266)
PWM (Da):   %s   30802.71 (28819.6)  
PI (pH):   %s   7.7 (7.75) Peptide Signal:   %s   cut: 21 range:21-286
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LVVFILGIAF ITAVPCPATG DLTLDFYKTT CPSAESTIKR VATKYIKKDK TLAAPLLRMH FHDCFVRGCD GSVLLNSTQN NTAEKAAIPN LSLRGFDVID AAKSELEEIC PGVVSCADIV  SLVARDAVVA ANNAGVSWPV KTGRRDGRVS NVSEVLSNIP SPFFNFSQLN AFFAAKGLSI EDLVVLSGGH TIGVGLCNFF SNRLYNFTGK GDMDPSLDKS YAKELKTKCT SLADNTTTVP 
MDPRSSLNFD RHYYRTLESN RGLFLSDAGL LTDSTSKSIA EKQLEG 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Short PS and 3' end are missing.