Entry information : TcPrx07
Entry ID 595
Creation 2005-07-06 (Christophe Dunand)
Last sequence changes 2005-07-06
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2005-07-06
Peroxidase information: TcPrx07
Name TcPrx07
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Theobroma
Organism Theobroma cacao (Cacao)    [TaxId: 3641 ]
Cellular localisation N/D
Tissue types Beans
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcPrx07
start..stop
S start..stop
GaPrx08 108 1e-30 12..82 6..78
GhPrx35 108 1e-30 12..82 6..78
CclPrx24 92 2e-24 15..82 9..80
CsPrx24 92 3e-24 15..82 9..80
Literature and cross-references TcPrx07
Literature Jones,P.G. et al., Planta 216 (2), 255-264 (2002)
Protein sequence: TcPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 82 (54)
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
8901.78 (5746.0) Transmb domain: %sTransmembrane domain
Calculation done with TMHMM
The topology is given as the position of the transmembrane helices
separated by i if the loop is on the inside or o if it is on the outside.
For example i7-29o44-66i87-109o means that it starts on the inside,
has a predicted TMH at position 7 to 29, the outside, then a TMH at position 44-66 etc.
i13-35o
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
9.4 (8.24) Peptide Signal: %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 29 range:29-82
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTFLTSKMHK HTLVALIWAL LILPNILGVS QGQLGVGFYS KTCPTAESII HKVVQKAVAD SLRNAALLLR LQFHDCFVEG CD 

Retrieve as FASTA  
Remarks TIGR partial sequence from 1 EST. Until FHDC, 3’ is missing . Mature leaf and mature bean.