Entry information : LePrx64 (Solyc01g067860.2.1[2.3])
Entry ID 596
Creation 2006-05-24 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx64 (Solyc01g067860.2.1[2.3])
Name (synonym) LePrx64 (Solyc01g067860.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx014]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Cell culture
Roots
Seedlings
Inducer Copper excess
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx64
start..stop
S start..stop
StPrx53 634 0 1..328 1..329
LePrx92 576 0 1..328 1..377
NtPrx06-1B 551 0 10..328 14..331
NtPrx06-1A 536 0 15..328 17..329
Literature and cross-references LePrx64 (Solyc01g067860.2.1[2.3])
Literature REFERENCE 1 van der Hoeven,R., et al, Generation of ESTs from Tomato Suspension Cultures.
REFERENCE 2 Tong,C.G.,et al, Identification of Novel copper response genes from tomato.
REFERNECE 3 Alcala,J. et al, Generation of ESTs from germinating tomato seed
EST ref. GenBank:   FS202359.1 [5' end]
Cluster/Prediction ref. UniGene:   Les.13408 [3' end]
Protein sequence: LePrx64 (Solyc01g067860.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (303)
PWM (Da):   %s   35676.4 (33204.1) Transmb domain:   %s   i5-27o
PI (pH):   %s   8.84 (8.91) Peptide Signal:   %s   cut: 26 range:26-328
Sequence
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Send to Peroxiscan
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MRSQLVLTCL VFLCLVLGGV AGGAAKVPRK NFYKSTRCPN AEQLIRDITW SKAKNDATLG AKLLRVHYHD CFVRGCDASI LLDKVGTVDS EKEARPNLSL GGFEVIDDIK RQVEAKCPGI  VSCADILALS ARDAVSFRFK TSMWEVETGR KDGNISLASD VNGNLPSPFS DFATLKQIFS NKGLNVDDLV ALSGAHTIGV SHCGAFSRRL FNFTGKGDMD PTLNATYAES LKKLCPNPAN 
PNTTVEMDPL SSTSFDSNYF NILINQNKGL FQSDAALLND KDSVIVIKKL LKDKTFFIEF AKSMKKMGAI QLLTGNAGEI RKNCRVKN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 3 introns) and 8 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAAGTC AATTAGTACT AACTTGTCTT GTTTTTCTAT GTCTTGTTCT TGGTGGAGTT GCTGGGGGTG CAGCTAAGGT ACCACGCAAG AACTTCTATA AGAGTACTCG TTGTCCAAAT  GCTGAACAAC TTATTAGAGA TATCACTTGG AGCAAAGCTA AAAATGATGC TACCTTGGGT GCTAAATTAC TTCGAGTTCA CTACCATGAT TGTTTTGTTA GGGTACGTAC CAATTAGAAT  ATTACTACTA AGCATATGTA CGTTATTTCA TAATAGGATT ATTTAAGTTA TGTACACTGA CATTGTAGGG GTGTGATGCA TCCATATTGC TAGACAAAGT GGGAACAGTT GATTCAGAGA  AGGAGGCTAG GCCAAATCTC TCTTTGGGTG GTTTCGAGGT GATTGATGAT ATCAAGCGAC AAGTTGAGGC TAAATGTCCT GGCATTGTTT CTTGTGCTGA CATTTTAGCT TTATCTGCTC  GTGATGCTGT TTCTTTTCGT GTAAGTTATA TAATAAGGAG ATTCAAGAAA TTAATTTATA CAATATATAT TTTTTAAAAA AAATTCTCTT CTATATATAA TTAAGTCTTT GCATGCATGT  GCGTAGTTTA AAACTTCAAT GTGGGAAGTG GAGACCGGAA GAAAAGATGG GAATATTTCC CTTGCTAGTG ATGTGAATGG AAACTTACCT TCACCATTCT CAGATTTTGC AACCCTTAAA  CAAATCTTTT CAAACAAAGG CCTAAATGTC GATGATCTCG TTGCGTTATC AGGTATAAAA AATATTATAT GTATCTTACA AAGCGAACAA CATAATAAAT CAATTTATAC TGTCAGTGTA  TACACACGTT TGTAATAATA TACTTGATGT ATATATGTAG GTGCTCACAC AATTGGTGTG TCTCATTGTG GAGCATTCTC AAGGAGACTC TTCAATTTCA CTGGCAAAGG TGATATGGAT  CCAACTCTTA ATGCTACTTA TGCTGAATCA TTGAAGAAAT TGTGCCCAAA TCCAGCCAAT CCAAATACTA CTGTGGAAAT GGACCCTTTA AGTTCAACTT CATTTGATAG CAATTATTTC  AACATTCTTA TTAATCAAAA CAAAGGGTTG TTCCAATCAG ATGCTGCACT TCTCAATGAC AAAGACTCAG TAATTGTCAT CAAGAAATTA CTAAAAGACA AGACTTTCTT TATTGAGTTT 
GCAAAATCCA TGAAGAAAAT GGGAGCCATT CAACTTCTTA CGGGAAATGC TGGAGAAATC AGGAAGAATT GTCGCGTTAA AAACTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAAGTC AATTAGTACT AACTTGTCTT GTTTTTCTAT GTCTTGTTCT TGGTGGAGTT GCTGGGGGTG CAGCTAAGGT ACCACGCAAG AACTTCTATA AGAGTACTCG TTGTCCAAAT  GCTGAACAAC TTATTAGAGA TATCACTTGG AGCAAAGCTA AAAATGATGC TACCTTGGGT GCTAAATTAC TTCGAGTTCA CTACCATGAT TGTTTTGTTA GGGGGTGTGA TGCATCCATA  TTGCTAGACA AAGTGGGAAC AGTTGATTCA GAGAAGGAGG CTAGGCCAAA TCTCTCTTTG GGTGGTTTCG AGGTGATTGA TGATATCAAG CGACAAGTTG AGGCTAAATG TCCTGGCATT  GTTTCTTGTG CTGACATTTT AGCTTTATCT GCTCGTGATG CTGTTTCTTT TCGTTTTAAA ACTTCAATGT GGGAAGTGGA GACCGGAAGA AAAGATGGGA ATATTTCCCT TGCTAGTGAT  GTGAATGGAA ACTTACCTTC ACCATTCTCA GATTTTGCAA CCCTTAAACA AATCTTTTCA AACAAAGGCC TAAATGTCGA TGATCTCGTT GCGTTATCAG GTGCTCACAC AATTGGTGTG  TCTCATTGTG GAGCATTCTC AAGGAGACTC TTCAATTTCA CTGGCAAAGG TGATATGGAT CCAACTCTTA ATGCTACTTA TGCTGAATCA TTGAAGAAAT TGTGCCCAAA TCCAGCCAAT  CCAAATACTA CTGTGGAAAT GGACCCTTTA AGTTCAACTT CATTTGATAG CAATTATTTC AACATTCTTA TTAATCAAAA CAAAGGGTTG TTCCAATCAG ATGCTGCACT TCTCAATGAC  AAAGACTCAG TAATTGTCAT CAAGAAATTA CTAAAAGACA AGACTTTCTT TATTGAGTTT GCAAAATCCA TGAAGAAAAT GGGAGCCATT CAACTTCTTA CGGGAAATGC TGGAGAAATC 
AGGAAGAATT GTCGCGTTAA AAACTAA 

Retrieve as FASTA