Entry information : LePrx03 (Solyc02g083490.2.1[2.3])
Entry ID 598
Creation 2006-01-24 (Christophe Dunand)
Last sequence changes 2014-08-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-25 (Christophe Dunand)
Peroxidase information: LePrx03 (Solyc02g083490.2.1[2.3])
Name (synonym) LePrx03 (Solyc02g083490.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Cell culture
Crown gall
Inducers Agrobacterium tumefaciens infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx03
start..stop
S start..stop
StPrx35 623 0 1..311 1..313
NtPrx42-1A 599 0 1..317 1..316
CroPrx21 494 1e-178 7..317 4..312
NtPrx34-1A 489 3e-176 18..317 19..318
Literature and cross-references LePrx03 (Solyc02g083490.2.1[2.3])
Literature van der Hoeven,R., et al,
Generation of ESTs from suspension culture
DNA ref. GenBank:   DU879931 [3' end]
Protein sequence: LePrx03 (Solyc02g083490.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (294)
PWM (Da):   %s   34918.96 (32114.6)  
PI (pH):   %s   9.96 (10.07) Peptide Signal:   %s   cut: 24 range:24-317
Sequence
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Send to Peroxiscan
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MAYFVPLLST FIFFSIYYSQ SNALSSNYYA KTCPQAEDIV MKVVKEEAQK DRTVPATLLR MHFHDCFLRG CDASILLSSK GKNTAEKDAP PNGSLHGFYV IDGAKRAVEA ICPGVVSCAD  ILAFAARDAV VLSGGPYWKV PKGRKDGRIS RASETTLLPK PTFNISQLQQ SFHQRGLSLD DLVALLGAHT LGFTHCSSFM NRIYNFNATH DIDPTLRPSF AASLKGICPL KNRAKNAGIS 
NDPSPTTFDN THYRLILQKK SLLFSDHSLL TIPKTKSLVY KFATSKAAFH KAFSNSMIKM SSLTGGQEVR KNCRVVN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 3 introns) and 2 ESTs and. Cultivar="Heinz 1706".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATACT TTGTTCCATT ATTGAGCACA TTTATTTTTT TCTCCATCTA CTATTCTCAA AGCAATGCAC TTAGTTCCAA TTACTATGCA AAAACATGCC CTCAAGCTGA AGACATAGTA  ATGAAGGTTG TTAAGGAGGA AGCACAGAAA GACAGAACAG TGCCCGCTAC ACTTCTAAGG ATGCATTTCC ATGATTGTTT CCTACGGGTA AATAAGCATC TTCGCTAAGC ATATTAGTTA  TTTTTACTGT ACTTACTTCC TCTGTTCTAC CTTGCTTGAA GGGTTGTGAT GCTTCTATTT TGTTGAGCTC CAAGGGGAAA AACACCGCGG AAAAGGACGC GCCTCCTAAT GGTTCTTTGC  ACGGATTCTA TGTTATTGAT GGTGCAAAGA GAGCAGTTGA AGCTATATGT CCTGGCGTAG TGTCTTGTGC TGATATTTTA GCGTTTGCTG CAAGAGATGC AGTTGTGTTA GTAAGTACAT  ATCCCCTGCA AAAGTTATAT ACTGAACATC TCTCTCGTGT TTGGATGATG TGGATTTGCA TAGAGTGTAA TAAATACTAT ATTGTATAAG CTTATTACTA GTTGTTTTTT CAGTCAGGCG  GACCTTACTG GAAGGTGCCT AAAGGAAGAA AAGACGGACG AATATCAAGA GCTAGTGAAA CAACACTGCT TCCAAAGCCT ACATTCAACA TTTCTCAACT CCAACAAAGC TTCCATCAAA  GAGGTCTCTC ACTAGACGAC TTGGTGGCTC TCTTAGGTCA GCACCAAACT TGATTTCTTA AAAATGGTCA CTCAACTTAC ATCTGATACG ACGATACATT TCTTCTCTCT GGCTTGCAGG  TGCGCACACT CTAGGATTTA CCCATTGCTC ATCATTTATG AACCGTATAT ACAACTTCAA CGCCACACAT GACATCGATC CTACACTACG TCCATCGTTT GCAGCAAGCT TGAAGGGCAT  ATGTCCACTC AAAAACAGGG CAAAAAACGC AGGAATAAGC AATGATCCTT CACCAACAAC ATTTGATAAT ACTCATTACA GGCTAATTCT ACAAAAGAAA AGTTTGTTAT TTTCGGATCA  TTCATTGCTC ACTATACCAA AAACGAAGAG CTTAGTTTAT AAGTTTGCTA CCTCAAAAGC AGCTTTTCAT AAGGCATTTT CTAATTCTAT GATTAAGATG AGTAGCCTTA CAGGAGGTCA 
AGAAGTTAGA AAAAATTGCA GGGTTGTAAA CTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATACT TTGTTCCATT ATTGAGCACA TTTATTTTTT TCTCCATCTA CTATTCTCAA AGCAATGCAC TTAGTTCCAA TTACTATGCA AAAACATGCC CTCAAGCTGA AGACATAGTA  ATGAAGGTTG TTAAGGAGGA AGCACAGAAA GACAGAACAG TGCCCGCTAC ACTTCTAAGG ATGCATTTCC ATGATTGTTT CCTACGGGGT TGTGATGCTT CTATTTTGTT GAGCTCCAAG  GGGAAAAACA CCGCGGAAAA GGACGCGCCT CCTAATGGTT CTTTGCACGG ATTCTATGTT ATTGATGGTG CAAAGAGAGC AGTTGAAGCT ATATGTCCTG GCGTAGTGTC TTGTGCTGAT  ATTTTAGCGT TTGCTGCAAG AGATGCAGTT GTGTTATCAG GCGGACCTTA CTGGAAGGTG CCTAAAGGAA GAAAAGACGG ACGAATATCA AGAGCTAGTG AAACAACACT GCTTCCAAAG  CCTACATTCA ACATTTCTCA ACTCCAACAA AGCTTCCATC AAAGAGGTCT CTCACTAGAC GACTTGGTGG CTCTCTTAGG TGCGCACACT CTAGGATTTA CCCATTGCTC ATCATTTATG  AACCGTATAT ACAACTTCAA CGCCACACAT GACATCGATC CTACACTACG TCCATCGTTT GCAGCAAGCT TGAAGGGCAT ATGTCCACTC AAAAACAGGG CAAAAAACGC AGGAATAAGC  AATGATCCTT CACCAACAAC ATTTGATAAT ACTCATTACA GGCTAATTCT ACAAAAGAAA AGTTTGTTAT TTTCGGATCA TTCATTGCTC ACTATACCAA AAACGAAGAG CTTAGTTTAT 
AAGTTTGCTA CCTCAAAAGC AGCTTTTCAT AAGGCATTTT CTAATTCTAT GATTAAGATG AGTAGCCTTA CAGGAGGTCA AGAAGTTAGA AAAAATTGCA GGGTTGTAAA CTAA 

Retrieve as FASTA