Entry information : Gint2CysPrx01_50803
Entry ID 5983
Creation 2007-11-22 (Christophe Dunand)
Last sequence changes 2012-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-30 (Christophe Dunand)
Peroxidase information: Gint2CysPrx01_50803
Name Gint2CysPrx01_50803
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Hexamitidae Giardia
Organism Giardia intestinalis (G. lamblia)    [TaxId: 5741 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Gint2CysPrx01_50803
start..stop
S start..stop
Gint2CysPrx01_P15 415 6e-151 1..201 1..201
Gint2CysPrx03_P15 413 3e-150 1..201 1..201
Gint2CysPrx03_50803 413 3e-150 1..201 1..201
Gint2CysPrx02_50803 371 6e-133 3..201 48..246
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 489922..490527 606  
complement(join(489922..490527))


exon

Literature and cross-references Gint2CysPrx01_50803
Literature Morrison,H.G., McArthur,A.G., Gillin,F.D., Aley,S.B., Adam,R.D., Olsen,G.J., Best,A.A., Cande,W.Z., Chen,F., Cipriano,M.J., Davids,B.J., Dawson,S.C., Elmendorf,H.G., Hehl,A.B., Holder,M.E., Huse,S.M., Kim,U.U., Lasek-Nesselquist,E., Manning,G., Nigam,A., Nixon,J.E., Palm,D., Passamaneck,N.E., Prabhu,A., Reich,C.I., Reiner,D.S., Samuelson,J., Svard,S.G. and Sogin,M.L. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science 317 (5846), 1921-1926 (2007).
Protein ref. UniProtKB:   A8B338
DNA ref. GenBank:   AACB02000001.1 (489922..490527)
mRNA ref. GenBank:   XM_001710064.1
Protein sequence: Gint2CysPrx01_50803
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   201
PWM (Da):   %s   22380.3  
PI (pH):   %s   6.12
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPVPIPGTPC PDFEVDVVTP ELKFAKRKLS DYKGKYLIVF FYPLDFTFVC PSEIIHFSNL AEQLKKKCNA EIIIGSTDSV YSHYAWCLQG QNEGGIGTCK CDLFADTNHK MARDFGVLVE 
DAGIALRGMF IVSDKGVVRH VTINDLPVGR SVEEAMRLVQ AFQYADKTGG VIPCGWTPEK NDTIIPDPEK KKEYFSKTFK K 

Retrieve as FASTA  
Remarks Complete sequence from DNA (no intron) and mRNA. Strain="WB C6 / ATCC 50803"
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGTCC CCATCCCCGG CACGCCCTGC CCCGACTTCG AGGTCGACGT CGTCACCCCT GAGCTTAAGT TCGCCAAGCG CAAGCTCTCT GACTACAAGG GCAAGTACCT GATTGTCTTC  TTCTACCCGC TCGACTTCAC CTTCGTCTGC CCCTCGGAGA TCATCCACTT CTCGAATCTG GCTGAGCAGC TGAAGAAGAA GTGCAACGCG GAGATCATCA TCGGCTCGAC GGACTCCGTC  TACAGCCACT ACGCCTGGTG CCTCCAGGGC CAGAACGAGG GCGGCATCGG GACGTGCAAG TGCGACCTCT TCGCCGACAC GAACCACAAG ATGGCCCGCG ACTTCGGCGT TCTGGTCGAG  GACGCCGGCA TTGCGCTCCG CGGGATGTTC ATCGTCTCTG ACAAGGGCGT CGTTCGCCAC GTCACGATCA ACGATCTTCC AGTGGGTCGC TCGGTGGAGG AGGCCATGCG CCTGGTCCAG  GCCTTCCAGT ACGCTGATAA AACCGGCGGC GTCATCCCGT GCGGCTGGAC CCCCGAGAAG AACGACACTA TCATCCCCGA CCCCGAGAAG AAGAAGGAGT ACTTCTCCAA GACGTTCAAG 
AAGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGTCC CCATCCCCGG CACGCCCTGC CCCGACTTCG AGGTCGACGT CGTCACCCCT GAGCTTAAGT TCGCCAAGCG CAAGCTCTCT GACTACAAGG GCAAGTACCT GATTGTCTTC  TTCTACCCGC TCGACTTCAC CTTCGTCTGC CCCTCGGAGA TCATCCACTT CTCGAATCTG GCTGAGCAGC TGAAGAAGAA GTGCAACGCG GAGATCATCA TCGGCTCGAC GGACTCCGTC  TACAGCCACT ACGCCTGGTG CCTCCAGGGC CAGAACGAGG GCGGCATCGG GACGTGCAAG TGCGACCTCT TCGCCGACAC GAACCACAAG ATGGCCCGCG ACTTCGGCGT TCTGGTCGAG  GACGCCGGCA TTGCGCTCCG CGGGATGTTC ATCGTCTCTG ACAAGGGCGT CGTTCGCCAC GTCACGATCA ACGATCTTCC AGTGGGTCGC TCGGTGGAGG AGGCCATGCG CCTGGTCCAG  GCCTTCCAGT ACGCTGATAA AACCGGCGGC GTCATCCCGT GCGGCTGGAC CCCCGAGAAG AACGACACTA TCATCCCCGA CCCCGAGAAG AAGAAGGAGT ACTTCTCCAA GACGTTCAAG 
AAGTAA 

Retrieve as FASTA