Entry information : Gint2CysPrx02_50803
Entry ID 5984
Creation 2007-11-22 (Christophe Dunand)
Last sequence changes 2012-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-30 (Christophe Dunand)
Peroxidase information: Gint2CysPrx02_50803
Name Gint2CysPrx02_50803
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Hexamitidae Giardia
Organism Giardia intestinalis (G. lamblia)    [TaxId: 5741 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Gint2CysPrx02_50803
start..stop
S start..stop
Gint2CysPrx02_P15 505 0 1..246 1..246
Gint2CysPrx01_50803 371 8e-133 48..246 3..201
Gint2CysPrx01_P15 371 1e-132 48..246 3..201
Gint2CysPrx03_P15 369 5e-132 48..244 3..199
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 74856..75596 741  
join(74856..75596)


exon

Literature and cross-references Gint2CysPrx02_50803
Literature Morrison,H.G., McArthur,A.G., Gillin,F.D., Aley,S.B., Adam,R.D., Olsen,G.J., Best,A.A., Cande,W.Z., Chen,F., Cipriano,M.J., Davids,B.J., Dawson,S.C., Elmendorf,H.G., Hehl,A.B., Holder,M.E., Huse,S.M., Kim,U.U., Lasek-Nesselquist,E., Manning,G., Nigam,A., Nixon,J.E., Palm,D., Passamaneck,N.E., Prabhu,A., Reich,C.I., Reiner,D.S., Samuelson,J., Svard,S.G. and Sogin,M.L. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science 317 (5846), 1921-1926 (2007).
DNA ref. GenBank:   AACB02000046.1 (74856..75596)
mRNA ref. GenBank:   XM_001704780.1
Protein sequence: Gint2CysPrx02_50803
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   246 (231)
PWM (Da):   %s   27510.79 (25980.9)  
PI (pH):   %s   6.64 (6.65) Peptide Signal:   %s   cut: 16 range:16-246
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLLLICLISV AFAAACTLTV NKNTCIPDKC EKFGDTEVCM QLKTTSSVPI PGTPCPDFEV EVLTPELKFT KRKLADYKGK YLIIFFYPAD FTFVCPSEII HFSSMAEQLK KKYNTEIIIG  STDTVYSHHA WCLQNKTDGG IGPCKCDLFA DTNHKMARDF GILVEEMGLA LRAMFIVSDK GIVRHVTIND FPVGRSVEEA MRMIQAFQYA DKTGGVIPCG WTPEKNDFII PDPEKKKEYF 
SKTFTK 

Retrieve as FASTA  
Remarks Complete sequence from DNA (no intron) and mRNA. Strain="WB C6 / ATCC 50803"
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTACTGC TGATATGTCT TATCTCGGTT GCCTTTGCGG CTGCTTGTAC GCTGACCGTG AATAAGAATA CGTGCATACC TGATAAGTGT GAGAAGTTTG GCGACACAGA AGTCTGCATG  CAGCTCAAGA CAACCAGTTC CGTTCCCATT CCAGGCACCC CTTGTCCCGA CTTTGAAGTG GAGGTCCTTA CCCCTGAACT CAAGTTTACT AAGCGTAAGC TTGCAGATTA CAAGGGCAAA  TATCTGATCA TCTTCTTCTA TCCAGCCGAC TTCACCTTTG TCTGTCCCTC TGAGATCATT CATTTTTCCT CTATGGCTGA GCAACTGAAG AAGAAGTATA ACACTGAGAT TATCATTGGC  TCGACAGACA CTGTTTATAG CCACCACGCT TGGTGCCTTC AGAATAAGAC AGACGGGGGG ATCGGGCCCT GCAAATGTGA TCTATTCGCC GACACGAATC ATAAGATGGC ACGTGATTTT  GGCATACTCG TTGAGGAAAT GGGTCTTGCT CTGCGTGCCA TGTTTATCGT CTCCGATAAA GGAATTGTAC GCCATGTTAC AATTAACGAT TTTCCTGTGG GTCGCTCTGT CGAAGAAGCT  ATGCGTATGA TTCAGGCCTT CCAGTACGCT GATAAAACCG GCGGTGTCAT CCCGTGCGGC TGGACTCCTG AGAAGAACGA CTTCATTATT CCTGATCCCG AAAAGAAGAA GGAATACTTT 
TCTAAGACCT TCACAAAGTG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTACTGC TGATATGTCT TATCTCGGTT GCCTTTGCGG CTGCTTGTAC GCTGACCGTG AATAAGAATA CGTGCATACC TGATAAGTGT GAGAAGTTTG GCGACACAGA AGTCTGCATG  CAGCTCAAGA CAACCAGTTC CGTTCCCATT CCAGGCACCC CTTGTCCCGA CTTTGAAGTG GAGGTCCTTA CCCCTGAACT CAAGTTTACT AAGCGTAAGC TTGCAGATTA CAAGGGCAAA  TATCTGATCA TCTTCTTCTA TCCAGCCGAC TTCACCTTTG TCTGTCCCTC TGAGATCATT CATTTTTCCT CTATGGCTGA GCAACTGAAG AAGAAGTATA ACACTGAGAT TATCATTGGC  TCGACAGACA CTGTTTATAG CCACCACGCT TGGTGCCTTC AGAATAAGAC AGACGGGGGG ATCGGGCCCT GCAAATGTGA TCTATTCGCC GACACGAATC ATAAGATGGC ACGTGATTTT  GGCATACTCG TTGAGGAAAT GGGTCTTGCT CTGCGTGCCA TGTTTATCGT CTCCGATAAA GGAATTGTAC GCCATGTTAC AATTAACGAT TTTCCTGTGG GTCGCTCTGT CGAAGAAGCT  ATGCGTATGA TTCAGGCCTT CCAGTACGCT GATAAAACCG GCGGTGTCAT CCCGTGCGGC TGGACTCCTG AGAAGAACGA CTTCATTATT CCTGATCCCG AAAAGAAGAA GGAATACTTT 
TCTAAGACCT TCACAAAGTG A 

Retrieve as FASTA