Entry information : TvaGPx01
Entry ID 5986
Creation 2007-11-22 (Christophe Dunand)
Last sequence changes 2012-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-24 (Christophe Dunand)
Peroxidase information: TvaGPx01
Name TvaGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Trichomonadidae Trichomonas
Organism Trichomonas vaginalis    [TaxId: 5722 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvaGPx01
start..stop
S start..stop
CglGPx01 209 8e-71 2..160 5..164
SceGPx03 207 7e-70 4..159 5..161
SpastGPx01 207 7e-70 4..159 5..161
SpaGPx02 207 9e-70 4..159 5..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1753..2235 483  
complement(join(1753..2235))


exon

Literature and cross-references TvaGPx01
Literature Carlton,J.M. et al., Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315 (5809), 207-212 (2007).
DNA ref. GenBank:   NW_001578727 (2235..1753)
mRNA ref. GenBank:   XM_001295799
Protein sequence: TvaGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   160
PWM (Da):   %s   18186.21  
PI (pH):   %s   8.03
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSIYEFVVKD NKGNDFHFDT LKGKVIMIVN TASKCGFTPQ YKDLEALYQK HKDEGFEIIA FPCNQFLSQE PGTDEEIASF CSLNYGVTFP IMKKINVNGE YAADIYKFLK EKESGFLGSA 
IKWNFTKFLI SRDGKKIKRY APTTNPSSIE KDVVEFIKEQ 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Strain="G3/ATCC PRA-98".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTATCT ACGAATTCGT CGTTAAAGAT AACAAAGGCA ACGATTTCCA CTTCGATACA CTTAAGGGAA AGGTTATCAT GATTGTTAAC ACTGCCAGTA AGTGTGGATT CACTCCTCAA  TACAAAGACC TCGAAGCCCT TTACCAAAAG CATAAAGATG AAGGCTTCGA AATCATTGCA TTCCCATGCA ATCAATTTTT ATCCCAAGAG CCAGGCACAG ATGAAGAAAT TGCCTCATTC  TGCTCATTGA ATTACGGAGT CACCTTCCCA ATTATGAAGA AGATCAATGT CAATGGTGAA TATGCTGCTG ACATTTACAA ATTCCTCAAG GAAAAAGAGA GTGGTTTCTT AGGCTCTGCA  ATCAAATGGA ATTTCACAAA GTTCTTAATT AGCCGCGATG GCAAGAAGAT AAAGCGCTAT GCTCCAACTA CAAATCCATC CTCAATCGAG AAAGATGTTG TTGAATTTAT TAAAGAACAA 
TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTATCT ACGAATTCGT CGTTAAAGAT AACAAAGGCA ACGATTTCCA CTTCGATACA CTTAAGGGAA AGGTTATCAT GATTGTTAAC ACTGCCAGTA AGTGTGGATT CACTCCTCAA  TACAAAGACC TCGAAGCCCT TTACCAAAAG CATAAAGATG AAGGCTTCGA AATCATTGCA TTCCCATGCA ATCAATTTTT ATCCCAAGAG CCAGGCACAG ATGAAGAAAT TGCCTCATTC  TGCTCATTGA ATTACGGAGT CACCTTCCCA ATTATGAAGA AGATCAATGT CAATGGTGAA TATGCTGCTG ACATTTACAA ATTCCTCAAG GAAAAAGAGA GTGGTTTCTT AGGCTCTGCA  ATCAAATGGA ATTTCACAAA GTTCTTAATT AGCCGCGATG GCAAGAAGAT AAAGCGCTAT GCTCCAACTA CAAATCCATC CTCAATCGAG AAAGATGTTG TTGAATTTAT TAAAGAACAA 
TAA 

Retrieve as FASTA