Entry information : TvaTPx01-1
Entry ID 5994
Creation 2007-11-23 (Christophe Dunand)
Last sequence changes 2012-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-30 (Christophe Dunand)
Peroxidase information: TvaTPx01-1
Name TvaTPx01-1
Class Thioredoxin-dependent thiol peroxidase    [Orthogroup: TPx001]
Taxonomy Eukaryota Trichomonadidae Trichomonas
Organism Trichomonas vaginalis    [TaxId: 5722 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvaTPx01-1
start..stop
S start..stop
TvaTPx01-2 344 5e-124 1..167 1..167
TvaTPx03 261 2e-91 1..167 2..168
BfrTPx02 250 7e-87 3..166 4..167
BfrTPx01 231 3e-79 2..166 3..166
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 179784..180287 504  
join(179784..180287)


exon

Literature and cross-references TvaTPx01-1
Literature Carlton,J.M. et al., Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315 (5809), 207-212 (2007).
Protein ref. UniProtKB:   A2DUP2
DNA ref. GenBank:   DS113249 (179784..180287)
mRNA ref. GenBank:   XM_001328129
Protein sequence: TvaTPx01-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   167
PWM (Da):   %s   17845.19  
PI (pH):   %s   5.64
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTTALQGNPV TVKGNFVKVG QQAPEFELVK GDLSSFHLSD VKGKYAVLNI FPSMDTGVCA ASVRKFNVLA TSLSDTVVLA ISKDLPFAQT RFCANEGIKN VIPLSDFRYT SHFAEDYGVL 
LASGPMNGLL ARAVVVLDPT GKVIYTEMVP EITHEPNYDA AMAALKH 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Strain="G3/ATCC PRA-98".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAACAG CTCTCCAAGG CAATCCAGTT ACAGTCAAGG GCAACTTCGT TAAGGTTGGC CAACAAGCTC CAGAATTCGA GCTTGTCAAG GGTGACTTAA GCTCTTTCCA CCTTTCTGAT  GTTAAGGGCA AGTATGCTGT TCTCAACATC TTCCCATCCA TGGATACCGG TGTTTGCGCC GCCTCCGTCC GCAAGTTCAA TGTCCTTGCT ACATCACTTT CCGACACCGT TGTTCTTGCA  ATTTCAAAGG ACTTACCATT TGCACAGACA AGATTCTGCG CAAACGAAGG CATCAAGAAC GTCATTCCTC TTTCTGACTT CAGATACACA TCACACTTTG CTGAAGACTA CGGTGTTCTC  CTTGCCAGTG GTCCAATGAA CGGTCTCTTA GCACGTGCCG TTGTTGTTCT TGATCCAACA GGCAAGGTCA TCTATACAGA AATGGTTCCA GAAATCACAC ACGAACCAAA CTACGATGCT 
GCTATGGCCG CTCTTAAGCA CTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAACAG CTCTCCAAGG CAATCCAGTT ACAGTCAAGG GCAACTTCGT TAAGGTTGGC CAACAAGCTC CAGAATTCGA GCTTGTCAAG GGTGACTTAA GCTCTTTCCA CCTTTCTGAT  GTTAAGGGCA AGTATGCTGT TCTCAACATC TTCCCATCCA TGGATACCGG TGTTTGCGCC GCCTCCGTCC GCAAGTTCAA TGTCCTTGCT ACATCACTTT CCGACACCGT TGTTCTTGCA  ATTTCAAAGG ACTTACCATT TGCACAGACA AGATTCTGCG CAAACGAAGG CATCAAGAAC GTCATTCCTC TTTCTGACTT CAGATACACA TCACACTTTG CTGAAGACTA CGGTGTTCTC  CTTGCCAGTG GTCCAATGAA CGGTCTCTTA GCACGTGCCG TTGTTGTTCT TGATCCAACA GGCAAGGTCA TCTATACAGA AATGGTTCCA GAAATCACAC ACGAACCAAA CTACGATGCT 
GCTATGGCCG CTCTTAAGCA CTAA 

Retrieve as FASTA