Entry information : LePrx13 (Solyc10g076210.1.1[2.3])
Entry ID 606
Creation 2005-06-14 (Christophe Dunand)
Last sequence changes 2014-08-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-25 (Christophe Dunand)
Peroxidase information: LePrx13 (Solyc10g076210.1.1[2.3])
Name (synonym) LePrx13 (Solyc10g076210.1.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Callus
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx13
start..stop
S start..stop
LePrx51 644 0 1..319 1..319
StPrx33 624 0 1..319 1..319
LePrx44 609 0 1..319 1..320
NtPrx89-1A 594 0 4..319 3..319
Literature and cross-references LePrx13 (Solyc10g076210.1.1[2.3])
Literature The Institute for Genomic Research, TIGR.
Protein sequence: LePrx13 (Solyc10g076210.1.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (295)
PWM (Da):   %s   35034.43 (32294.0) Transmb domain:   %s   i7-24o
PI (pH):   %s   5.42 (5.06) Peptide Signal:   %s   cut: 25 range:25-319
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSSSFVFL HVLIIFCVAR IAFSDLSDDF YDDICPQALP TIKRVVEDAI SQERRMGASL LRLHFHDCFV NGCDASILLD QTSTIDSEKT ARANNNSARG FEVIDRIKSE VDKVCGRSVV  SCADILAVAA RDSVVALHGP TWEVELGRRD STTASRTTAN NDIPTPLMDL PALIDNFKKQ GLDEEDLVAL SGGHTLGFAQ CFTFRNRIYN ETNNIDSTFA SQRQANCPRS GGDSNLASLD 
PTSALFDSKY FSNLVSKKGL LHSDQALFSG GETDELVKTY STDLRTFSKD FAKSMIKMGN IKPLTGNEGQ IRIDCRRVN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo10, introns 1 and 2) and 6 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTCTAGCTT TGTGTTTCTT CATGTGTTAA TCATATTTTG TGTAGCACGC ATAGCTTTTT CGGATTTGTC AGATGATTTC TATGATGATA TTTGTCCCCA AGCTTTACCA  ACCATTAAAC GGGTTGTTGA GGATGCAATC AGCCAAGAGA GGCGAATGGG TGCCTCTTTG CTACGATTAC ATTTTCATGA TTGTTTCGTT AATGTCAGTT TAATTTCTTT CTCACCTAGC  TAGTTAACAA TGTTTGGTAA TTGCTTGAGA TGTTGTTACT AATTATTATA ATGATAAATG CAGGGTTGTG ACGCTTCCAT TCTTCTTGAT CAAACATCTA CTATTGACAG TGAAAAGACC  GCTCGTGCTA ATAACAATTC AGCAAGAGGA TTTGAGGTGA TCGATAGAAT TAAGTCAGAA GTTGATAAAG TTTGTGGACG TTCAGTTGTA TCTTGTGCGG ACATCTTGGC TGTTGCAGCT  CGTGACTCCG TTGTTGCTGT GCGTATTACT CCTTTTTCCC CCTAATATAT AGAAGCTAAA GTTAATTTAG TGTACTGATA AGTATTTTGT TACATTGACA CAGTTACATG GACCAACATG  GGAAGTGGAA CTAGGAAGAA GGGATTCGAC TACAGCAAGT AGAACCACTG CCAATAATGA CATTCCAACA CCGTTGATGG ACTTACCTGC ACTTATCGAC AACTTTAAGA AGCAAGGTTT  GGATGAGGAA GACCTGGTGG CTCTCTCCGG TGGCCACACA CTAGGGTTTG CTCAGTGTTT CACCTTCAGG AATCGCATCT ATAATGAGAC TAACAACATC GACTCTACCT TTGCAAGTCA  ACGTCAAGCA AATTGTCCGC GAAGTGGTGG TGATTCCAAT CTTGCTTCCC TAGATCCTAC ATCTGCTCTT TTTGACTCGA AATATTTTAG TAACTTGGTG TCCAAGAAAG GGCTTTTGCA  TTCTGATCAA GCACTGTTTA GCGGAGGAGA GACTGATGAG CTTGTTAAAA CCTACAGTAC TGACTTAAGG ACTTTTTCGA AAGATTTTGC TAAGTCTATG ATTAAGATGG GTAATATCAA 
GCCACTCACT GGAAATGAAG GCCAAATTCG TATCGATTGC AGGAGGGTGA ACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTCTAGCTT TGTGTTTCTT CATGTGTTAA TCATATTTTG TGTAGCACGC ATAGCTTTTT CGGATTTGTC AGATGATTTC TATGATGATA TTTGTCCCCA AGCTTTACCA  ACCATTAAAC GGGTTGTTGA GGATGCAATC AGCCAAGAGA GGCGAATGGG TGCCTCTTTG CTACGATTAC ATTTTCATGA TTGTTTCGTT AATGGTTGTG ACGCTTCCAT TCTTCTTGAT  CAAACATCTA CTATTGACAG TGAAAAGACC GCTCGTGCTA ATAACAATTC AGCAAGAGGA TTTGAGGTGA TCGATAGAAT TAAGTCAGAA GTTGATAAAG TTTGTGGACG TTCAGTTGTA  TCTTGTGCGG ACATCTTGGC TGTTGCAGCT CGTGACTCCG TTGTTGCTTT ACATGGACCA ACATGGGAAG TGGAACTAGG AAGAAGGGAT TCGACTACAG CAAGTAGAAC CACTGCCAAT  AATGACATTC CAACACCGTT GATGGACTTA CCTGCACTTA TCGACAACTT TAAGAAGCAA GGTTTGGATG AGGAAGACCT GGTGGCTCTC TCCGGTGGCC ACACACTAGG GTTTGCTCAG  TGTTTCACCT TCAGGAATCG CATCTATAAT GAGACTAACA ACATCGACTC TACCTTTGCA AGTCAACGTC AAGCAAATTG TCCGCGAAGT GGTGGTGATT CCAATCTTGC TTCCCTAGAT  CCTACATCTG CTCTTTTTGA CTCGAAATAT TTTAGTAACT TGGTGTCCAA GAAAGGGCTT TTGCATTCTG ATCAAGCACT GTTTAGCGGA GGAGAGACTG ATGAGCTTGT TAAAACCTAC  AGTACTGACT TAAGGACTTT TTCGAAAGAT TTTGCTAAGT CTATGATTAA GATGGGTAAT ATCAAGCCAC TCACTGGAAA TGAAGGCCAA ATTCGTATCG ATTGCAGGAG GGTGAACTAA 

Retrieve as FASTA