Entry information : NtRboh04_bottom (NtRbohD_bottom)
Entry ID 6081
Creation 2008-01-29 (Christophe Dunand)
Last sequence changes 2011-04-22 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2017-01-12 (Catherine Mathe)
Peroxidase information: NtRboh04_bottom (NtRbohD_bottom)
Name (synonym) NtRboh04_bottom (NtRbohD_bottom)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtRboh04_bottom
start..stop
S start..stop
NtRboh04_BelW3 1919 0 1..939 1..938
NbRboh02 1895 0 1..939 1..939
LeRboh02 1814 0 1..939 1..938
StRboh03 1795 0 1..939 1..938
Literature and cross-references NtRboh04_bottom (NtRbohD_bottom)
Literature Simon-Plas F., Elmayan T., Blein J.P. The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells. Plant J. 31:137-147(2002).
Protein ref. UniProtKB:   Q8RVJ9
mRNA ref. GenBank:   AJ309006
Protein sequence: NtRboh04_bottom (NtRbohD_bottom)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   939
PWM (Da):   %s   105486.73 Transmb domain:   %s   o367-389i509-531o551-573i734-751o
PI (pH):   %s   9.15
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQNSENHHPH HQHHHSDTEI IGNDRASYSG PLSGPLNKRG GKKSARFNIP ESTDIGTSVG TGGKSNDDAY VEITLDVRED SVAVHSVKTA GGDDVEDPEL ALLAKGLEKK STLGSSLVRN  ASSRIRQVSQ ELRRLASLNK RPIPTGRFDR NKSAAAHALK GLKFISKTDG GAGWAAVEKR FDEITASTTG LLPRAKFGEC IGMNKESKEF AVELYDALAR RRNITTDSIN KAQLKEFWDQ  VADQSFDSRL QTFFDMVDKD ADGRITEEEV REIIGLSASA NRLSTIQKQA DEYAAMIMEE LDPNNLGYIM IENLEMLLLQ APNQSVQRGG ESRNLSQMLS QKLKHTQERN PIVRWYKSFM  YFLLDNWQRV WVLLLWIGIM AGLFTWKYIQ YKEKAAYKVM GPCVCFAKGA AETLKLNMAI ILFPVCRNTI TWLRNKTRLG AAVPFDDNLN FHKVIAVAIA LGVGIHGLSH LTCDFPRLLN  ASEEEYEPMK YYFGDQPESY WWFIKGVEGV TGIIMVVLMA IAFTLATPWF RRNRVSLPKP FHKLTGxNAF WYSHHLFVIV YTLFIVHGEK LYITKDWYKR TDMDVLLTIP IILYASERLI  RAFRSSIKAV KILKVAVYPG NVLALHMSKP QGYKYKSGQY MFVNCAAVSP FEWHPFSITS APGDDYLSVH IRTLGDWTRQ LKTVFSEVCQ PPPNGKSGLL RADYLQGENN PNFPRVLIDG  PYGAPAQDYK KYEVVLLVGL GIGATPMISI VKDIVNNMKA MDEEENSLED GHNNNMAPNS SPNIAKNKGN KSGSASGGNN FNTRRAYFYW VTREQGSFDW FKGIMNEAAE MDHKGVIEMH 
NYCTSVYEEG DARSALITML QSLHHAKNGV DIVSGTRVKS HFAKPNWRNV YKRIALNHPE AKVGVFYCGA PALTKELRQH ALDFSHKTST KFDFHKENF 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA. Cultivar="bottom special".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCACGAGAA AATCCCCAAT CTTTTATTTG TTTATTAAAA TTAGTACGCC AAGAAAGAAA GAAAGAAAGA CAGAAAGACT CGGTCTTCTT TCTTCTCTTG GTCTGAAACT CCAAAATAGA  ATACCAATTA TTAATCTTTT GTCATCTTTT TCCTTCTCGC GTTCATATAT ACTGGAATAT ACATCTTTTT TTCAACCTAT CTTCTTTCAT TTTCAAGAAT TCGGGTTCCA TAAATAGTAG  GTTCACTACT TTTATTTCAA CCTCCTTAAA GTTTATTCAT TCATATTTTT TCTCAAAGAA AAAACTATAG AAATGCAAAA TTCGGAAAAT CATCATCCGC ACCACCAGCA CCACCATTCG  GACACAGAGA TAATTGGAAA TGATAGAGCG TCGTACAGTG GTCCGTTAAG CGGACCGTTA AACAAACGAG GCGGCAAAAA GAGTGCGAGA TTTAACATTC CTGAATCTAC CGACATCGGA  ACCAGTGTCG GAACCGGCGG CAAGTCCAAT GATGATGCGT ACGTTGAAAT CACTCTCGAT GTCCGCGAAG ATTCCGTCGC TGTCCACAGT GTCAAAACTG CCGGCGGTGA TGACGTGGAA  GATCCCGAGC TGGCTTTATT GGCTAAAGGC TTAGAGAAGA AGTCCACTTT AGGATCTTCA CTTGTTCGAA ATGCTTCGTC TAGAATTCGG CAAGTGTCAC AAGAGCTCAG GCGTTTGGCT  TCCTTAAATA AACGCCCAAT TCCTACTGGA AGGTTCGACA GGAATAAATC AGCTGCTGCT CATGCTCTTA AAGGTCTCAA GTTTATTAGT AAGACCGACG GCGGCGCTGG TTGGGCCGCC  GTCGAGAAGC GGTTCGATGA GATTACTGCT TCTACTACTG GTTTGCTTCC TCGTGCCAAA TTTGGAGAAT GTATAGGTAT GAATAAGGAG TCTAAGGAAT TTGCTGTTGA GCTATATGAT  GCGCTAGCTC GGAGGAGAAA CATTACAACT GATTCCATTA ACAAAGCACA GCTCAAAGAG TTCTGGGACC AAGTGGCTGA CCAAAGTTTT GATTCTCGCC TTCAAACATT TTTTGACATG  GTTGATAAAG ATGCTGATGG TAGAATTACA GAAGAAGAAG TCAGAGAGAT TATAGGCCTT AGCGCGTCGG CCAACAGGCT GTCAACAATC CAGAAACAAG CTGATGAATA CGCAGCAATG  ATCATGGAAG AGTTGGATCC TAACAACCTC GGATACATTA TGATTGAGAA CTTGGAAATG CTTTTACTGC AAGCACCAAA TCAATCAGTG CAAAGAGGAG GCGAAAGTCG GAACTTGAGT  CAAATGCTAA GTCAAAAACT AAAGCATACA CAAGAGAGAA ATCCAATAGT AAGATGGTAC AAGAGTTTCA TGTACTTTTT GCTGGATAAT TGGCAAAGAG TTTGGGTATT GTTACTGTGG  ATTGGAATTA TGGCTGGTCT ATTTACATGG AAATATATAC AGTATAAAGA AAAAGCTGCA TATAAAGTCA TGGGTCCCTG TGTGTGTTTT GCCAAAGGTG CTGCTGAAAC ACTCAAGCTC  AACATGGCAA TTATTTTATT TCCGGTTTGC AGAAACACGA TCACATGGCT TCGAAATAAG ACCAGATTAG GTGCTGCTGT TCCTTTTGAT GATAACCTTA ATTTTCACAA AGTGATAGCA  GTGGCAATTG CTCTTGGGGT TGGAATACAC GGACTATCTC ACTTGACATG TGATTTTCCT CGGCTTTTAA ATGCTAGTGA AGAAGAATAT GAACCAATGA AGTACTATTT TGGAGATCAG  CCAGAAAGCT ATTGGTGGTT TATAAAAGGA GTAGAAGGGG TAACTGGAAT TATAATGGTG GTTTTAATGG CAATAGCATT TACTCTAGCA ACCCCATGGT TTAGAAGGAA TAGAGTTAGT  TTGCCAAAAC CATTTCACAA ACTCACTGGA TnTAATGCCT TTTGGTACTC TCACCATCTC TTTGTTATCG TCTACACTCT GTTCATTGTG CATGGTGAAA AGCTATACAT TACCAAAGAT  TGGTACAAGA GAACCGACAT GGATGTACTT TTAACTATCC CAATCATACT CTATGCTAGT GAAAGGTTGA TTAGGGCATT CAGGTCAAGC ATTAAAGCTG TTAAGATTTT GAAGGTGGCA  GTATATCCAG GAAATGTGTT GGCACTTCAC ATGTCAAAAC CACAGGGCTA CAAATACAAA AGTGGGCAAT ACATGTTTGT CAACTGTGCT GCAGTTTCTC CATTTGAGTG GCATCCATTT  TCAATTACTT CGGCCCCAGG AGATGACTAT CTCAGTGTCC ATATTCGAAC TCTTGGTGAT TGGACCAGGC AACTTAAAAC TGTTTTCTCC GAGGTTTGCC AGCCACCACC TAATGGAAAA  AGTGGACTCC TCAGAGCTGA CTACTTGCAA GGAGAGAATA ATCCTAATTT CCCAAGGGTG TTAATAGATG GACCATATGG AGCACCAGCA CAAGACTACA AGAAATATGA GGTGGTTTTG  TTGGTAGGTC TTGGAATTGG AGCTACACCA ATGATCAGTA TTGTTAAAGA CATTGTCAAC AACATGAAGG CAATGGACGA AGAAGAAAAT TCCTTGGAAG ATGGACACAA TAATAATATG  GCACCAAATT CTAGCCCCAA TATTGCAAAA AATAAGGGTA ATAAATCAGG TTCAGCAAGT GGAGGAAATA ATTTCAATAC AAGGAGAGCA TATTTCTATT GGGTTACTAG AGAACAAGGT  TCATTTGATT GGTTCAAAGG TATAATGAAT GAAGCTGCTG AAATGGACCA TAAGGGAGTA ATTGAAATGC ATAATTATTG TACTAGTGTT TATGAAGAAG GTGATGCTCG TTCTGCTCTT  ATTACTATGC TTCAGTCTCT TCACCATGCC AAAAATGGTG TTGACATTGT CTCTGGCACC AGAGTTAAGT CACATTTTGC TAAACCTAAT TGGCGTAATG TCTACAAACG CATTGCTCTC  AACCACCCTG AGGCTAAAGT TGGGGTCTTC TATTGTGGGG CACCAGCACT GACCAAAGAA CTAAGACAAC ACGCCTTGGA TTTTTCACAC AAGACATCTA CCAAGTTTGA TTTCCATAAA  GAAAATTTTT GAGCAAAGAA TAGACCATTA AGCAGAGCAT TAAAATTTCA TCAAAACAGC TAAGGACACA GGTTGTTTTA TAGAAGTCTA CCAACTCTCC CTATTGTGTA CAGATAATGT 
TGCACTTCAA GTTGATATAT AGTTGTGGTT GTGATGCTAG TATATTACAA AATAATAAGA TTATTTTTAT TTGTAGTAAA AAAAAAAAAA AAAAAAAA 

Retrieve as FASTA