Entry information : PgRboh01
Entry ID 6082
Creation 2008-01-29 (Christophe Dunand)
Last sequence changes 2008-01-29 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2008-01-29 (Christophe Dunand)
Peroxidase information: PgRboh01
Name PgRboh01
Class Respiratory burst oxidase homolog    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea glauca (white spruce)    [TaxId: 3330 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PgRboh01
start..stop
S start..stop
PabRboh83 660 0 356..669 641..954
PabRboh83 361 3e-113 1..175 299..473
PtaRboh01 605 0 356..669 72..388
WnoRboh01 576 0 356..669 612..921
WnoRboh01 282 5e-84 1..175 270..444
PabRboh96 561 0 357..669 475..783
PabRboh96 97 3e-21 1..71 238..309
Literature and cross-references PgRboh01
Literature Arborea Phase 2 - EST sequencing in Picea glauca (white spruce). Unpublished (2007)
EST ref. GenBank:   EX371443 [3' end]
Cluster/Prediction ref. UniGene:   Pgl.17668 [3' end]
Protein sequence: PgRboh01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   669
PWM (Da):   %s   56360.22 Transmb domain:   %s   i106-125o
PI (pH):   %s   9.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ITEEEVKEVI MLSASANKLS KLKEQAEEYA ALIMEELDPN HLGYIEIQNL EMLLLELPNE NAKHANTSLN LSQMISQKLV PTRISNPIER WLQKAKFFVE DNWKRIWVLL LWLSILAVLF  TWKFIQYKDR AVYHVMGYCV CTAKGAAETL KFNMALILFP VCRNTITWLR NKTKLEKRVQ xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx  xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxYKSVK  IQKVAIYPGN VLALHVSKPQ GFKYKSGQYM FVNCPAVSSF EWHPFSITSS PGDDFLSVHI RTLGDWTREL KTVFSKVCEP PGGGKSGLLR ADYMQGENNP SFPRLLIDGP YGAPAQDYRK  YDVLLLVGLG IGATPFISIV KDIVNNMKLK EEESNHLENG SNGSKHKKKS FNTSRAYFYW VTREQGSLEW FKGVMNEVAE IDDKRIIELH NYCTSVYEEG DARSALIAML QALNHAKHGV 
DIVSGTRVKT HFAKPNWRNV FKRVAVNHKD QRVGVFYCGA PGLTNELKQL SLDFTRKTST RFDFHKENF 

Retrieve as FASTA  
Remarks Partial sequence from 6 ESTs (EX372712, EX442566, EX356471), EX327660 and EX327960: probably genomic or sequencin error or alternative splicing (middle fragment and 3'end!!!).