Entry information : SmRboh01-1_52 (SmRboh01a_52)
Entry ID 6086
Creation 2008-01-29 (Christophe Dunand)
Last sequence changes 2011-02-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-23 (Christophe Dunand)
Peroxidase information: SmRboh01-1_52 (SmRboh01a_52)
Name (synonym) SmRboh01-1_52 (SmRboh01a_52)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmRboh01-1_52
start..stop
S start..stop
SmRboh01-2_7 1784 0 1..884 1..899
SmRboh02-2_137 1085 0 48..884 70..902
SmRboh02-1_19 1083 0 48..884 63..895
PtRboh03 1035 0 73..884 111..948
Literature and cross-references SmRboh01-1_52 (SmRboh01a_52)
Literature JGI
DNA ref. JGI genome:   scaffold_52 (409431..413311)
Protein sequence: SmRboh01-1_52 (SmRboh01a_52)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   884
PWM (Da):   %s   99725.12 Transmb domain:   %s   o331-350i467-489o512-534i566-588o689-711i
PI (pH):   %s   9.33
Sequence
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Send to Peroxiscan
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MVKEDHITVE MRNLSGAGAR SRGTSRTSSA NTGTGGEVLV ELQIGRADSD DSLLEINSLN SSSDHSAKRI TSSKWKQFSQ ELKKLSLSRS GTNKGGAGAA AAAGGARLPR TKSSAETAIK  GLRFISKATE KADREQLWQD VATRFDSLAV DGFLSRADFG ACIGGMKDSK EFAGQLFDCL ARKMDVNQLK IDKDQAREFW FWISDPSFDS RLEIFFDMYD KNSDGRITEE EVKEVIKISA  SENKLSKLKE QADEYAALIM EELDPDNLGY VELWQLETLL RGEIVGASQR YSTQNVSQML SQALVPPHRR GHLHEIKSKT KYFLAENWKR IWVLALWIAA CVGLFTWKFV QYRNKAAFDV  MGYCLCIAKG AAETLKLNMA LILFPMCRNF LTYLRSTWLN QVVPFNDNIN FHKVIAAGIV VGVLLHGGMH ITCDIPRLVS YDEEEFIAKI GRGFNYRQPT YWEVVKGVEG VTGIVMVVLM  AIAFTLATHK FRRNLVKFPW PFHRMTGFNT FWYTHHLFII VYVLLIIHGI FLYLTYKWQQ KTTWMYVAIP VLLYAFERIR RVFKSTVYPV KVVKVAIYTG NVMALYMTKP PNFRYKSGMY  MVLNCPAVSP FEWHPFSITS APGDEYLSVH IRTLGDWTAE LKNVFSQICE PSAGGKSGLL RAEAWNSGDS SKFPKLFIDG PYGAPSQDYT SYDILLLVGL GIGATPFISV LKDMLNNMKK  NETSADVRIP MPSPRRSPGN STVPGWTPTN AYFYWVTREQ GSFDWFKGVM NEVAEIDSKA VIELHNYLTS VYEEGDVRSA LITMVQSLQH ARNGVDIISG TRVKTHFARP NWRKVLSRLE 
KLHRGARIGV FYCGAPALGK ELDALCKEYS HHNITKFDFQ KENF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. No prediction from JGI
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAAAG AGGATCACAT AACGGTCGAG ATGAGGAACT TGTCTGGCGC TGGCGCCAGA TCCAGGGGCA CGTCGCGAAC CAGCTCCGCA AACACGGGCA CCGGCGGCGA GGTTCTCGTG  GAGCTCCAGA TCGGGAGGGC CGACAGCGAC GACTCGCTGC TAGAGATCAA CAGCCTAAAC AGCAGCTCCG ACCATAGCGC CAAGAGGATC ACGTCCTCCA AGTGGAAGCA ATTCTCCCAG  GAGCTCAAGA AGCTCTCGTT GAGCCGGAGT GGTACCAACA AGGGGGGGGC GGGGGCGGCG GCGGCGGCGG GCGGGGCTAG GCTCCCGCGC ACCAAATCCT CCGCCGAGAC CGCCATCAAG  GGGCTTCGAT TCATCAGCAA GGCCACCGAG AAGGCCGACC GGGAGCAGCT ATGGCAGGAT GTGGCGACGC GGTTCGACTC CCTGGCCGTG GATGGATTCC TCTCGCGCGC CGATTTTGGA  GCTTGCATTG GTGAGTTTTC TTGTTCTTGG CCTCGTTTGA ATCTTGTTGG GTTTGGATCG CTCCTTCTCT CGATCCGAGG CCTGGGCTGG CGATCGGATC ATGTGGGTCG GGTGATCCCG  ACACGATCTG TCGTGGGTTC CACCCCTCTC GTGCTCGTTT TGCTCGAGCC CCTCGATCCC CTGGCTTGCC GCTGCGATTT CTCGCTGCTG GGGACGTGGG TCTCGCTGGC TCGTGATCCC  CAGGGGATTG CTCTGGTGAC TCCGTGATGG GTCCGCCGCA TTTCTCGATC TTGGAATGGT TTCTCGCTCC TATCATTGTC CGCATTGGTT GCGATGCCAG TGCATGTGAT GACTGTTGAA  AGTCTGCAGC ACTACAGTGG CCGCATTGTG TGCTTTTTTG CTCGACCTTT TCTCACGATC GATCTGTCGG AATCAAATCT CAGCCTCTTT TGTCTTGGAT CTACAGGTAT GAAAGATTCA  AAGGAGTTTG CGGGACAGTT GTTCGATTGT CTAGCCCGCA AAATGGACGT GAACCAGCTC AAAATCGATA AAGACCAGGC TCGCGAGTTT TGGTTCTGGA TCTCCGACCC GAGCTTCGAC  TCCAGGCTCG AAATCTTCTT CGACATGTAC GTAAAAATCT GAATTTTCCT CTTCTTTCAA CTCAACCGGT TTTGCACAGG TGCGACAAAA ATTCCGACGG AAGGATTACG GAAGAAGAAG  TGAAAGAGGC AAGCTTTCTT CCATTCTTTT TGTTCCATTA CTGCTTGCTA CGACGACGCT GACTAACGAA AAAAATTCTA TTCTTTTGTT CCACTATTGC TTGCTACGAC GACGCTGACT  AACGATCGCG AAAAATTTCT TTGTCCAGGT CATTAAAATA AGCGCGAGTG AGAACAAGCT CTCGAAACTC AAGGAGCAAG CCGACGAGTA CGCGGCGCTG ATCATGGAAG AATTAGACCC  GGACAATCTG GGTTATGTCG AGGTTTGCCA TCCATCTTTG ACTCTCGTTA AGCTCACGAC CAAATCACTC GCTCACTCTA GACTTTGTGT CACTTTCTTG CAGCTATGGC AACTTGAAAC  TCTCCTACGT GGTGAGATTG TCGGTGCCTC GCAGCGATAC TCCACACAAA ACGTAAGCCA GATGCTAAGT CAAGCACTGG TTCCACCACA CAGACGGGGC CACTTGCACG AGATCAAGTC  CAAGACCAAG TATTTCCTGG CCGAGAACTG GAAGAGGATT TGGGTGCTGG CGCTGTGGAT CGCTGCGTGC GTCGGGCTTT TCACCTGGAA GTTCGTCCAG TACCGGAACA AGGCCGCGTT  TGATGTCATG GGATATTGTC TCTGCATCGC CAAAGGTGCG GCCGAGACTC TCAAGCTCAA CATGGCTTTG ATCTTGTTTC CAATGTGTCG GAACTTTCTC ACGTACTTGA GATCGACTTG  GCTCAACCAG GTCGTGCCTT TCAACGACAA TATCAACTTT CACAAGGTAA AGTTCTAGCT AGCTCTTTTC CTGATGTTTA AACGTTTTCT CCCTTCGAGC AGACTATAGC GGCTGGAATC  GTCGTGGGTG TTCTTCTCCA CGGAGGAATG CATATAACTT GCGATATCCC GAGGCTTGTG AGCTACGACG AGGAGGAATT CATCGCGAAG ATCGGGCGTG GATTCAACTA TAGGCAGCCA  ACTTACTGGG AGGTTGTCAA GGGCGTGGAG GGAGTGACGG GGATTGTCAT GGTGGTTCTC ATGGCGATAG CTTTCACACT CGCAACTCAC AAGTTTCGGC GAAATCTCGT CAAGTTCCCG  TGGCCTTTCC ACCGGATGAC GGGATTCAAC ACGTTTTGGT ACACACATCA CCTCTTCATC ATCGTCTACG TGCTTCTCAT CATCCACGGC ATCTTCCTCT ACCTGACTTA CAAATGGCAG  CAAAAAACTG TAAGATCATC TTGCTCCAAA TTCACGTTCT TACTTTTTCC TTTCAAACGC AGACTTGGAT GTATGTTGCG ATCCCTGTCC TTCTCTACGC GTTTGAAAGG ATTCGCAGGG  TTTTCAAGTC TACTGTTTAT CCGGTGAAAG TCGTAAAGGT AGGACTTCAC CACCGTTGTT TGCATGGAGA TTGAAAAATC TGGGTTCCTT TTTGTCAAAC TTTTCAGGTG GCTATCTACA  CTGGCAACGT CATGGCTTTG TACATGACCA AGCCTCCAAA CTTCCGGTAC AAGAGTGGAA TGTACATGGT CTTGAACTGT CCAGCAGTCT CTCCATTTGA GTGGTGAGTT TCTTTCACAT  TTTTTTCCCA TTTTTTTTAT AATGATTCTC AAGAACTTGT CTATGTGATC GTGTTACAGG CATCCATTCT CAATCACTTC CGCTCCAGGC GACGAGTATC TCAGCGTTCA CATCAGAACT  CTCGGTGACT GGACGGCAGA ACTTAAGAAC GTGTTCTCGC AAATTTGCGA ACCATCCGCT GGTGGCAAGA GTGGATTGCT GCGTGCCGAG GCATGGAACT CCGGGGACAG CTCAAAGTAA  GCCATCTTTA CTTTTCCTCG AGAGAGAGCC GCAAGAACTA ATCTATGATC CAATCCTTCG CAGCTTTCCA AAGCTCTTCA TCGATGGGCC TTACGGAGCT CCATCGCAGG ACTACACCTC  CTACGACATT CTCCTTCTCG TCGGCCTGGG CATTGGAGCC ACTCCCTTCA TCAGTGTTCT CAAAGACATG CTCAACAACA TGAAGAAGAA CGAGACGAGC GCCGACGTGA GGATCCCAAT  GCCCAGCCCT AGAAGAAGTC CAGGGAACTC CACGGTCCCC GGCTGGACTC CCACGAACGC TTACTTCTAC TGGGTTACAC GAGAGCAAGG ATCTTTCGAC TGGTTCAAAG GTGTCATGAA  CGAAGTTGCC GAGATTGACT CCAAGGTTGG AAGTTTTCGT ATGATGTTTC CATTCTTACA CGTTCTTACG ATGTTTTGTC AGGCTGTTAT CGAGCTACAT AACTATTTGA CGAGTGTTTA  CGAAGAGGGC GATGTTCGAT CGGCCCTGAT TACGATGGTG CAAAGTCTAC AGCATGCACG GAATGGGGTC GATATTATTT CGGGAACTCG GGTACTTTTC TAGCCTCTTT CCTTGAATTT  CTTCGTGTTT CTAGTTCTCT TATATGTGTT CTTCATCTTT GGCCAGGTTA AGACTCACTT TGCCCGTCCA AACTGGAGAA AGGTTCTGTC GAGGCTGGAG AAGCTTCACA GAGGCGCGAG  AATTGGTATG TTTGTGAGCT TTTCTTTGCT AAAACGTGAC AAAATTTTCA GGTGTGTTTT ACTGTGGAGC CCCGGCTCTT GGCAAGGAAT TGGATGCGTT GTGCAAGGAA TACAGCCACC 
ATAACATCAC CAAGTTTGAC TTTCAAAAGG AAAACTTTTA G 

Retrieve as FASTA