Entry information : SlRboh03-1
Entry ID 6092
Creation 2008-02-08 (Christophe Dunand)
Last sequence changes 2008-02-08 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-04-19 (Christophe Dunand)
Peroxidase information: SlRboh03-1
Name SlRboh03-1
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella lepidophylla    [TaxId: 59777 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SlRboh03-1
start..stop
S start..stop
SmRboh01-2_7 884 0 6..520 172..687
SmRboh01-1_52 881 0 6..520 176..691
SmRboh02-1_19 731 0 6..518 187..699
SmRboh02-2_137 729 0 6..518 194..706
Literature and cross-references SlRboh03-1
Literature Yobi,A., Iturriaga,G. and Cushman,J.C. An expressed sequence tag (EST) collection from the resurrection plant Selaginella lepidophylla under a dehydration-rehydration cycle.
EST ref. GenBank:   EH092143.1 [5' end]   EH093031.1 [3' end]   EH092295.1 [Fragment]
Protein sequence: SlRboh03-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   520
PWM (Da):   %s   59547.63 Transmb domain:   %s   o162-181i295-317o343-365i
PI (pH):   %s   9.04
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GNSPGIFDCL TRKMGINRLS INKDETRDCW FWISDPSFDS RMEIFFDMCD KNADGRITEE EVKEIIKLSA SENKLSRIKE QAGEYAALIM EELDPDNLGY IELWQLETLL RGEVVGGSQR  FSATQNYSQL MSQALAPPSR KGALHTFGKK ARYFFTENWR RIWVLSLWLA IMAGLFSWKF IQYRNKDAFK IMGYCLCIAK GAAETLKLNM ALILLPMCRN TLTYLRSTWL RKIVPFNDNI  NFHKTIAGAI VVGVVLHGGM HLTCDIPRIA NADPEDFEEY LGRGFKHKQP SYWDVVRGVE GVTGVIMVVI MIIAFVLATH KFRRNLVKLP WPFHRMTGFN AFWYTHHLFI IVYVLLIIHG  LFLYLTFKWQ VKTTWMYILV PVTLYASERL WRAFRSTVYP VQLVKVAIYS GNVMALHMTK PPNFRYKSGM YMVLNCPAVS PFEWHPFSIT SAPDDEYLSV HIRTLGDWTG QLKAVFSEVC 
EPPVGGKSGL LRAEAIADYT KFPKLFIDGP YGAPAQDYTC 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs. 5' and 3' ends are missing.