Entry information : LeRboh02 (whitefly-induced gp91-phox / Wfi1)
Entry ID 6099
Creation 2008-02-17 (Daniel Marino)
Last sequence changes 2010-07-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-07-16 (Christophe Dunand)
Peroxidase information: LeRboh02 (whitefly-induced gp91-phox / Wfi1)
Name (synonym) LeRboh02 (whitefly-induced gp91-phox / Wfi1)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LeRboh02
start..stop
S start..stop
StRboh03 1876 0 1..938 1..938
NtRboh04_BelW3 1832 0 1..938 1..938
NbRboh02 1820 0 1..938 1..939
NtRboh04_bottom 1813 0 1..938 1..939
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..604 604 N° 2 744..906 163 N° 3 1011..1059 49 N° 4 1179..1292 114
N° 5 1374..1802 429 N° 6 1922..2305 384 N° 7 2398..2493 96 N° 8 2798..2913 116
N° 9 3092..3194 103 N° 10 3437..3510 74 N° 11 4141..4715 575 N° 12 4907..5016 110
join(1..604,744..906,1011..1059,1179..1292,1374..1802,1922..2305,2398..2493,2798 ..2913,3092..3194,3437..3510,4141..4715,4907..5016)


exon

Literature and cross-references LeRboh02 (whitefly-induced gp91-phox / Wfi1)
Literature Puthoff DP, Walling LL A tomato homolog (Wfi1) of the mammalian gp91-phox is induced in response to insect feeding and pathogen attack. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   Q9LDD7
DNA ref. GenBank:   AF147783
mRNA ref. GenBank:   AF148534
Cluster/Prediction ref. UniGene:   Les.20537   Les.26
Protein sequence: LeRboh02 (whitefly-induced gp91-phox / Wfi1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   938
PWM (Da):   %s   105010.59 Transmb domain:   %s   o367-389i509-531o551-573i733-750o
PI (pH):   %s   9.45
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQNSENHHPHHHHHHSDTEVIGNDRASYSGPLSGPLNKRGGKKCARFNIPESTDIGTSAGAGAKSNDDAYVEITLDVREDSVAVHSVKTAGGADVEDPELALLAKGLEKKSTLGASLVRNASSRIRQVSQELKRLASLNKRPIPTGRFDRNKSAAAHALKGLKFISKTDGGAGWAAVEKRFDEITASTTGLLPRAKFGECIGMNKESKEFAGELYDALARRRNITTDSINKAQLKEFWDQVADQSFDTRLQTFFDMVDKDADGRITEEEVRIIGLSASANRLSTIQKQSDEYAAMIMEELDPNNLGYIMIENLEMLLLQAPNQTVQRGGESRNLSQMLSQKLKHTQEPNPLVRWYKSFKYFLLDSWQRVWVLLLWIGIMAGLFTWKYIQYKQKAAYGVMGPCVCLAKGAAETIKLNMAIILLPVCRNTITWLRNKTRLGSAVPFDDNLNFHKVIAVAVALGVAIHGLAHLTCDFPRLLNASEGAYEPMIYYFGEQPESYWWFVKGVEGVTGIIMVILMAIAFTLATPWFRRGRVSFPKPFHKLTGFNAFWYSHHLFIIVYTLLIVHGEKLYITKTWYKRTTWMYLTVPLALYAGERLLRAFRSSIKAVKILKVAVYPGNVLALHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRQLKTVFSVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGPYGAPAQDYKQYEVVLLVGLGIGATPMISIVKDIVNNMKAMDEEENSLENGHGMSNAAQNASPNMAQKRGKSGSASGRNSFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHNYCTSVYEEGDARSALITMLQSLHHAKNGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKGVFYCGAPALTKELKQHALDFSHKTSTKFDFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns), 1 mRNA and 41 ESTs. Cultivar="Rutgers", "Kennebec" and "Shepody".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAAATTCGGAAAATCATCACCCACACCATCACCATCATCACTCGGATACGGAGGTTATAGGGAATGATAGAGCGTCGTACAGTGGTCCTTTAAGCGGACCGCTGAACAAACGAGGA
GGAAAAAAGTGCGCGAGGTTTAATATACCGGAATCTACTGACATCGGAACTAGTGCAGGAGCCGGCGCCAAGTCCAATGACGATGCTTATGTGGAAATCACTCTCGATGTTCGTGAAGAC
TCTGTGGCTGTCCACAGTGTGAAAACTGCCGGCGGTGCTGACGTGGAAGATCCGGAGTTGGCTTTATTGGCTAAAGGTTTGGAGAAGAAATCTACCTTGGGAGCTTCACTTGTACGAAAT
GCTTCTTCGAGAATCCGGCAAGTGTCTCAAGAGCTCAAGCGATTGGCTTCCTTAAATAAGCGCCCAATTCCTACTGGAAGGTTCGACAGGAATAAATCAGCTGCTGCTCATGCTCTTAAA
GGTCTTAAGTTCATCAGCAAAACTGACGGCGGCGCTGGATGGGCCGCCGTCGAGAAGCGGTTCGATGAGATTACTGCTTCAACTACTGGCTTGCTTCCTCGGGCCAAATTTGGAGAATGC
ATAG
GTAAATTAAATGAATTATAGTCACAACAGACAATTATTTCGTGTTGTATACTTCATTTTAGTGTTACTTTTTCGTGTAGTTTTATTTTTCTTGAGCTTGTTAAAATGGAAAATGAA
AATAAATTGTTTTTGAATGTTAGGTATGAATAAGGAGTCTAAGGAATTTGCTGGAGAGCTATATGATGCGCTTGCTCGAAGGAGAAACATCACAACTGATTCCATTAACAAAGCACAACT
CAAAGAGTTCTGGGACCAAGTTGCAGATCAAAGTTTTGATACTCGACTTCAGACCTTCTTTGACAT
GTAAGGGTTAATTATCAGTTACAGTTCAATATTTATCTCATAAATTAAGCATCT
CAGATTCAATCGTTCAGATCTAAATCGTGTGATGAATTTAATTAATACAGGGTTGATAAAGATGCAGATGGTAGAATCACAGAAGAAGAAGTCAGAGAGGTATTTCTGAATTCTGTTTTT
TAATTTTTTTATTGTACGTCAGAAACTCGGTATGGCATTGACAAAGTCGATCATATTTTATATTTTTTTTCTTCTATAATTTGTTTTGCGATTTGCAGATTATCGGCCTTAGTGCGTCTG
CCAACAGGCTGTCAACTATCCAGAAACAATCTGATGAATACGCGGCAATGATCATGGAAGAGTTGGATCCTAATAACCTGGGATACATTATG
GTAATTAAGAGGCATTAATAGTAAGCTT
AAATTTATAGAACTAAATTGAAAATTAACTGTTGATGCTATGATATTCAACAGATTGAGAACTTGGAAATGCTTTTACTGCAAGCACCAAATCAAACGGTGCAGAGAGGAGGCGAAAGCC
GGAACTTGAGTCAGATGCTAAGTCAGAAACTTAAGCACACACAAGAGCCAAATCCATTAGTGAGATGGTATAAGAGTTTTAAGTACTTTTTGCTGGATAGTTGGCAAAGAGTTTGGGTAT
TGTTGTTGTGGATTGGAATCATGGCTGGTCTATTTACTTGGAAGTATATTCAGTATAAACAAAAAGCTGCATATGGTGTTATGGGTCCCTGTGTGTGTCTTGCTAAGGGTGCTGCTGAGA
CAATCAAGCTCAACATGGCTATCATTTTACTCCCAGTTTGCAGAAACACAATTACCTGGCTTCGTAACAAGACCAGATTAGGTTCTGCAGTTCCTTTCGATGATAATCTCAATTTTCACA
AA
GTAAGTTGATTAATTGTGCACAAGTCTAATGTCCAAATGATTATAGTTTTATCTATAAGACGTTTGAGTAGTCGATGGCTCATTACAGGAAACTAATTGGTTCGTTTTCCTCTGTTTA
GGTGATAGCAGTCGCGGTTGCACTTGGGGTTGCAATACACGGACTAGCTCATTTAACGTGTGATTTTCCTCGGCTTCTGAATGCTAGTGAAGGAGCATATGAACCAATGATATACTATTT
TGGAGAACAGCCCGAAAGCTATTGGTGGTTTGTTAAGGGAGTTGAAGGGGTAACTGGAATTATAATGGTGATCCTAATGGCAATAGCTTTTACCCTAGCAACCCCATGGTTTAGAAGGGG
CAGAGTCAGTTTCCCTAAACCATTTCACAAGCTCACTGGATTCAATGCCTTTTGGTACTCACACCATCTGTTTATCATTGTCTACACTCTACTTATTGTCCATGGAGAAAAACTATACAT
AACCAAAACTTGGTACAAGAGAACG
GTTAGTAAAATGTTCAAAACCTTTTATTTTCATTTAAGTTTCTAAGTTGATGAATGTCGCTAAAATTTAAATTGATTATTCGTAATTGGCAGACA
TGGATGTACCTTACTGTCCCACTAGCACTCTATGCTGGTGAAAGGTTGCTTAGAGCATTCAGGTCAAGCATCAAAGCCGTTAAGATTTTGAAG
GTAAATCCAATCCGACAAAAGTGTCGT
GCTCTTAATAATTCAAGATAAATTTACATTTTAGTCCCTCAGTAATTAACAAATTTCAGTTTTAGTCCAAATGATACACAATTAAATTATTCAGCTTCCCATATGTTTTATATGCTTAAT
TTATTTTGTTACTTCACAGTTGGGATGATAAAATAAATTAAATAATGTAATGTATTTTCTATATAAAGGGATAAAAAATGCAATTATCTTATATTCCATATAATCGTGACTTCATAAAAA
TGAAAATAGACAAACTAATTAATTGTGGAATTTGTAGGTGGCTGTGTATCCAGGAAATGTGTTGGCCCTTCACATGTCAAAACCACAAGGCTACAAATACAAAAGTGGGCAATACATGTT
TGTCAACTGTGCTGCGGTTTCACCATTTGAATG
GTAGGTGAAACTTTTCTTATTTAATTATTAAAATAATGGAATCAACCCATCCATTTTTTATTATATATTTCTCATGTCATAATAAAC
GTGACCAAGTCATGAATTTTTGGTATCCTTTAATTACCTCGTCTCTGCAGTATTTGCTGACTTATGGATAAACATTAATATAAAATTTCAGGCATCCATTTTCCATTACTTCGGCCCCAG
GAGATGACTATCTCAGTGTCCATATTAGAACTCTTGGTGATTGGACCAGACAACTTAAAACTGTTTTCTCCGAG
GTAATTACTAATTAGACCATTTAAATATAATTATATATTACTTAAA
TCCTTAAACCAAAATATCTAGTTAATTAAAATAGTGGAGGCATGATTGTTCCACTTTGGATGACAGCTTTAAAAGCCGTCTCTTATATTTTTTCTTTATGTCGTTTTTTCCCAAAAAGTA
AATGTTAATTCCACTATGTTAGTTTTAATTATTGATCTTCCTGAATTAATTATTAGTAATTTTTGGTCTTTGTTAGGTTTGCCAGCCACCACCTAATGGGAAAAGTGGACTCCTTAGAGC
TGACTACTTGCAAGGAGAGAATAATCCAAA
GTAAGTCCTTTTCCATTCTATAATCATCTTTTTAAGCACACTGAAATGCAGAATTAAATTAAAAAAACTCTCACCTTAATATCCGGGGAT
ATTATTCTTATAATACAAACTTTTTGATAATTTAATACTGCAAATGTAATTAGTTTAGATCTTAAAGTGATCGTGATTGGTCTGGTCTGGTACCTATAACAAACCTGTAGTCAGTTTTAT
CCTAAAGAAATCTGTACACGTTTTGAATGGACCACTTCTTAAAGTACTACAGGATTATTATTTTGTGAAATTACCGGGATAGGGACAAGGAGGGATAGAACAGAACTCAATTATTGCTTG
ATATTTCTAAGGACACAAAAAAGAACCATTTGCTTGCAAGATATTTTTCTAGTTAAGAATTAATTTTACATATATCTACAATTTTTAATATGCTATAGAAGGTTACTTGTTTAATTTCTC
AAATTACAAAATTTTATTATTATTATACATAATTACTTCTAATTGCCTTCTAGATAATTCAAAAAATAGTGCAATAACATTTTTAAGAGTCCAAATAACATCATATAAGGTGGAAGTTAA
ACTCTACCATGAAAATTTAATTAAATGGCATAGCTAATGGTAATCATATGTAATTGGCAGTTTCCCAAGAGTGTTAATTGATGGACCATACGGAGCACCAGCACAAGACTACAAGCAGTA
TGAGGTGGTTTTATTGGTGGGTCTTGGAATTGGAGCCACACCAATGATCAGTATCGTTAAAGACATTGTCAACAACATGAAGGCCATGGACGAAGAAGAAAATTCCTTGGAAAATGGGCA
CGGGATGTCCAATGCAGCACAAAATGCTAGCCCAAATATGGCACAGAAGAGGGGTAAATCAGGTTCAGCAAGTGGAAGAAATAGCTTCAATACAAGGAGGGCATATTTCTATTGGGTCAC
AAGGGAACAAGGTTCATTTGACTGGTTCAAAGGTATAATGAATGAAGCTGCTGAAATGGATCATAAGGGAGTAATTGAAATGCACAATTATTGTACAAGTGTTTATGAAGAAGGTGATGC
TCGTTCTGCTCTTATTACTATGCTTCAGTCACTTCATCATGCCAAAAATGGTGTAGACATTGTTTCTGGCACGAGAGTTAAGTCACACTTTGCTAAGCCTAATTGGAGAAACGTCTACAA
ACGCATTGCTCTCAACCACCCAGAGGCTAAAGTTG
GTGAGTACTATTAATCAATCTTCTTTCTTTTGACTTTGGTGTCTTTATGTCCTTGTGAGAGTTGAAAAAAGCATGTTCAATTGAT
AAGTTTTTCTTTGTGAAAGCAATTGGCACTAGTGTCATTTTCAAATCCATTTCATGACATATATTGTCGATGGCTAACTCGTTTTCCCTTTTTTGACAATTTGCAGGAGTGTTCTACTGT
GGGGCACCGGCACTAACGAAAGAGCTAAAACAACACGCATTGGATTTTTCACACAAGACATCCACCAAGTTTGATTTCCATAAAGAAAATTTTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAAATTCGGAAAATCATCACCCACACCATCACCATCATCACTCGGATACGGAGGTTATAGGGAATGATAGAGCGTCGTACAGTGGTCCTTTAAGCGGACCGCTGAACAAACGAGGA
GGAAAAAAGTGCGCGAGGTTTAATATACCGGAATCTACTGACATCGGAACTAGTGCAGGAGCCGGCGCCAAGTCCAATGACGATGCTTATGTGGAAATCACTCTCGATGTTCGTGAAGAC
TCTGTGGCTGTCCACAGTGTGAAAACTGCCGGCGGTGCTGACGTGGAAGATCCGGAGTTGGCTTTATTGGCTAAAGGTTTGGAGAAGAAATCTACCTTGGGAGCTTCACTTGTACGAAAT
GCTTCTTCGAGAATCCGGCAAGTGTCTCAAGAGCTCAAGCGATTGGCTTCCTTAAATAAGCGCCCAATTCCTACTGGAAGGTTCGACAGGAATAAATCAGCTGCTGCTCATGCTCTTAAA
GGTCTTAAGTTCATCAGCAAAACTGACGGCGGCGCTGGATGGGCCGCCGTCGAGAAGCGGTTCGATGAGATTACTGCTTCAACTACTGGCTTGCTTCCTCGGGCCAAATTTGGAGAATGC
ATAG
GTATGAATAAGGAGTCTAAGGAATTTGCTGGAGAGCTATATGATGCGCTTGCTCGAAGGAGAAACATCACAACTGATTCCATTAACAAAGCACAACTCAAAGAGTTCTGGGACCAA
GTTGCAGATCAAAGTTTTGATACTCGACTTCAGACCTTCTTTGACAT
GGTTGATAAAGATGCAGATGGTAGAATCACAGAAGAAGAAGTCAGAGAGATTATCGGCCTTAGTGCGTCTGCC
AACAGGCTGTCAACTATCCAGAAACAATCTGATGAATACGCGGCAATGATCATGGAAGAGTTGGATCCTAATAACCTGGGATACATTATG
ATTGAGAACTTGGAAATGCTTTTACTGCAA
GCACCAAATCAAACGGTGCAGAGAGGAGGCGAAAGCCGGAACTTGAGTCAGATGCTAAGTCAGAAACTTAAGCACACACAAGAGCCAAATCCATTAGTGAGATGGTATAAGAGTTTTAAG
TACTTTTTGCTGGATAGTTGGCAAAGAGTTTGGGTATTGTTGTTGTGGATTGGAATCATGGCTGGTCTATTTACTTGGAAGTATATTCAGTATAAACAAAAAGCTGCATATGGTGTTATG
GGTCCCTGTGTGTGTCTTGCTAAGGGTGCTGCTGAGACAATCAAGCTCAACATGGCTATCATTTTACTCCCAGTTTGCAGAAACACAATTACCTGGCTTCGTAACAAGACCAGATTAGGT
TCTGCAGTTCCTTTCGATGATAATCTCAATTTTCACAAA
GTGATAGCAGTCGCGGTTGCACTTGGGGTTGCAATACACGGACTAGCTCATTTAACGTGTGATTTTCCTCGGCTTCTGAAT
GCTAGTGAAGGAGCATATGAACCAATGATATACTATTTTGGAGAACAGCCCGAAAGCTATTGGTGGTTTGTTAAGGGAGTTGAAGGGGTAACTGGAATTATAATGGTGATCCTAATGGCA
ATAGCTTTTACCCTAGCAACCCCATGGTTTAGAAGGGGCAGAGTCAGTTTCCCTAAACCATTTCACAAGCTCACTGGATTCAATGCCTTTTGGTACTCACACCATCTGTTTATCATTGTC
TACACTCTACTTATTGTCCATGGAGAAAAACTATACATAACCAAAACTTGGTACAAGAGAACG
ACATGGATGTACCTTACTGTCCCACTAGCACTCTATGCTGGTGAAAGGTTGCTTAGA
GCATTCAGGTCAAGCATCAAAGCCGTTAAGATTTTGAAG
GTGGCTGTGTATCCAGGAAATGTGTTGGCCCTTCACATGTCAAAACCACAAGGCTACAAATACAAAAGTGGGCAATACATG
TTTGTCAACTGTGCTGCGGTTTCACCATTTGAATG
GCATCCATTTTCCATTACTTCGGCCCCAGGAGATGACTATCTCAGTGTCCATATTAGAACTCTTGGTGATTGGACCAGACAACTT
AAAACTGTTTTCTCCGAG
GTTTGCCAGCCACCACCTAATGGGAAAAGTGGACTCCTTAGAGCTGACTACTTGCAAGGAGAGAATAATCCAAATTTCCCAAGAGTGTTAATTGATGGACCA
TACGGAGCACCAGCACAAGACTACAAGCAGTATGAGGTGGTTTTATTGGTGGGTCTTGGAATTGGAGCCACACCAATGATCAGTATCGTTAAAGACATTGTCAACAACATGAAGGCCATG
GACGAAGAAGAAAATTCCTTGGAAAATGGGCACGGGATGTCCAATGCAGCACAAAATGCTAGCCCAAATATGGCACAGAAGAGGGGTAAATCAGGTTCAGCAAGTGGAAGAAATAGCTTC
AATACAAGGAGGGCATATTTCTATTGGGTCACAAGGGAACAAGGTTCATTTGACTGGTTCAAAGGTATAATGAATGAAGCTGCTGAAATGGATCATAAGGGAGTAATTGAAATGCACAAT
TATTGTACAAGTGTTTATGAAGAAGGTGATGCTCGTTCTGCTCTTATTACTATGCTTCAGTCACTTCATCATGCCAAAAATGGTGTAGACATTGTTTCTGGCACGAGAGTTAAGTCACAC
TTTGCTAAGCCTAATTGGAGAAACGTCTACAAACGCATTGCTCTCAACCACCCAGAGGCTAAAGTTG
GAGTGTTCTACTGTGGGGCACCGGCACTAACGAAAGAGCTAAAACAACACGCA
TTGGATTTTTCACACAAGACATCCACCAAGTTTGATTTCCATAAAGAAAATTTTTGA

Retrieve as FASTA