Entry information : NtPrx06-1B (TOBCPI40KB / NtPrx06b)
Entry ID 61
Creation 2006-06-19 (Christophe Dunand)
Last sequence changes 2011-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-13 (Christophe Dunand)
Peroxidase information: NtPrx06-1B (TOBCPI40KB / NtPrx06b)
Name (synonym) NtPrx06-1B (TOBCPI40KB / NtPrx06b)
Class Class III peroxidase    [Orthogroup: Prx036]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx06-1B
start..stop
S start..stop
NtPrx06-1A 615 0 19..331 17..329
LePrx64 551 0 14..331 10..328
StPrx53 543 0 14..331 10..329
LePrx92 520 0 30..331 75..377
Literature and cross-references NtPrx06-1B (TOBCPI40KB / NtPrx06b)
Literature Matsumoto,S., Narita,H., Ikura,K. and Sasaki,R.Nucleotide sequence of cationic peroxidases (Accession No.D42065,D42064) abundantly secreted by cultured tobacco cells Plant Physiol. 110, 713-714 (1996)
Protein ref. UniProtKB:   Q40487
mRNA ref. GenBank:   D42065
Cluster/Prediction ref. UniGene:   Nta.9551
Protein sequence: NtPrx06-1B (TOBCPI40KB / NtPrx06b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (305)
PWM (Da):   %s   35930.38 (33254.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.8 (8.91) Peptide Signal:   %s   cut: 27 range:27-331
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGTAQLLLLS NIFLVFLSIV VCGVSGAGNN VPRKNFYKST RCPNAEQFVR DITWSKAKND STLGAKLLRL HYHDCFVRGC DASILLDKVG TDQFEKEARP NLSLGGFDVI DDIKRQVEEK  CPGIVSCADI LALATRDAVS FRFKKSLWDV ATGRKDGNVS LASEVNGNLP SPFSDFATLQ QLFAKKGLNV NDLVALSGAH TIGVAHCGAF SRRLFNFTGK GDVDPSLSST YAESLKQLCP 
NPANPATTVE MDPQSSTSFD SNYFNILTQN KGLFQSDAAL LTDKKSAKVV KQLQKTNAFF SEFAKSMQKM GAIEVLTGNA GEIRKNCRVR N 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA and 12 ESTs. cationic peroxidase. Cultivar="Bright Yellow 2".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAAGGAATT GACAAGTTTC TGGGAGGGTT GTATTTGCTA ACTACTACTC GTAGTATGTA TTTTAGGAGT CATATATTAG TGGGGACTTT GTGAAGATAA AGTCGACACA ACCCATAAAC  TAAGGCCAAA ATCATGTGAG CAATTATTTG TATCATCCCA CTAGCTATCG CCTTGCAGCT TTGCCTATAA AAGGAAACTT TCCTTGAAGG GTAAATCCAT TGTGCCTTAA TTCATTTGGT  TTCTCATCAT CTTATTTCTA ATTAGGTTTA AGTCCGTCGA CATTATTGTC TTGTTTTCAT TTCCTAGCAA GGAATAAAAA GAAAATGGGA ACTGCTCAAT TACTGCTACT AAGTAATATT  TTTCTTGTTT TTCTTTCTAT TGTTGTTTGT GGAGTTTCGG GTGCAGGAAA TAATGTGCCA CGCAAGAATT TCTACAAGAG CACTCGTTGT CCAAATGCTG AACAATTTGT TAGAGATATC  ACTTGGAGCA AAGCTAAGAA TGACTCCACG TTGGGTGCTA AATTGCTTCG ACTCCACTAC CATGATTGTT TCGTTAGGGG ATGTGATGCA TCGATATTGC TCGATAAAGT TGGAACAGAT  CAATTTGAGA AGGAGGCCAG GCCAAACCTC TCCTTGGGTG GTTTCGATGT AATTGATGAT ATCAAGCGAC AAGTTGAGGA AAAATGTCCT GGGATTGTTT CTTGTGCAGA CATTTTAGCA  TTAGCTACTC GTGACGCTGT TTCTTTTCGA TTTAAGAAAT CACTATGGGA CGTGGCGACC GGAAGAAAAG ACGGGAATGT TTCCCTTGCA AGTGAAGTGA ATGGAAACTT ACCTTCACCA  TTCTCAGATT TTGCCACCCT TCAGCAACTG TTTGCAAAGA AAGGCCTAAA TGTCAATGAT CTTGTTGCAT TATCAGGTGC TCACACCATT GGTGTTGCTC ATTGTGGAGC TTTCTCTAGA  AGACTCTTCA ATTTCACTGG CAAAGGTGAC GTGGATCCAT CTTTGAGTTC CACTTATGCT GAATCTTTGA AACAATTGTG CCCTAATCCA GCCAACCCAG CCACTACAGT GGAAATGGAC  CCTCAGAGCT CAACTTCATT TGACAGCAAT TATTTCAACA TCCTTACTCA GAACAAAGGG TTGTTCCAAT CTGATGCAGC CCTCCTCACA GACAAAAAAT CAGCTAAAGT TGTAAAACAA  CTGCAAAAAA CTAATGCCTT TTTTTCTGAG TTTGCTAAAT CCATGCAGAA AATGGGAGCT ATTGAAGTTC TTACTGGAAA TGCTGGAGAA ATCAGGAAGA ATTGCCGCGT CAGAAACTAA  TTCTTGAAAA CCTATGATTA ATTTTATGTC ATATATATGT AATCTCTAAA GTGTACAACA TCTGGTATTT AGTTTCTGTC TATTTGTTTC TTTTCCTTTT TGAAAGTGAT GTGTTATTTG 
TGTTGGAAAT GTATTTGACA AATTAACTTA TTTATTAATG TATTTGATCA AAAGGCTCTT TATTTTC 

Retrieve as FASTA