Entry information : VvRboh01-2 (VvRboh01-b)
Entry ID 6102
Creation 2008-02-19 (Daniel Marino)
Last sequence changes 2008-02-19 (Daniel Marino)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2009-03-01 (Christophe Dunand)
Peroxidase information: VvRboh01-2 (VvRboh01-b)
Name (synonym) VvRboh01-2 (VvRboh01-b)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvRboh01-2
start..stop
S start..stop
VvRboh01 1740 0 1..873 1..894
PtRboh10 1473 0 1..873 1..886
CsRboh03 1456 0 1..873 1..889
CclRboh03 1456 0 1..873 1..889
Literature and cross-references VvRboh01-2 (VvRboh01-b)
Literature Jaillon O., et al., (2007)The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449:463-467.
Protein ref. GenPept:   CAO17538 UniProtKB_Uniparc:   A7PS24
DNA ref. GenBank:   CU459244 (1885370..1890015)
EST ref. GenBank:   FC063747.1 [5' end]
Protein sequence: VvRboh01-2 (VvRboh01-b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   873
PWM (Da):   %s   99234.04 Transmb domain:   %s   o323-342i402-424o462-484i504-526o536-553i687-704o
PI (pH):   %s   9.7
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEIQENHDQA SSETESVRSG RVGFSGPLSG PSSGPPSGPL LGNKKGSKKS ARFKSEEYVE ITLDVRDDSV SRPSLGSQLS FRIRQVSQEL KRITSSSSKR FNKDDRSKSS ATRALKGLQF  MTKNVGNEGW SAIEKRFDQL SVNGALPKSS FGQCIGMKDS KEFASELFDA LARRRGITSN SITRAELREF WEQITDQSFD ARLQTFFDMV DKDDDGRITE GEVKEIITLS ASANKLSKIQ  ERADEYAALI MEELDPDNLG YIELHNLELL LLQAPNPSTN LTTNSRILSQ LLSQKLVPTK EPNPIKRCFR GIEYFIEDNW KRIWVVLLWL AICAGLFTWK FIQYKNRAVF EVMGYCVTAA  KGAAETLKFN MALILFPVCR NTITWLRSRT KLGMAVPFDD NINFHKVIAF GIALGVGVHA IAHLTCDFPR LLHATEEQYE PMEKYFGHDQ PRSYWWFVKG TEGWTGVVMV VLMAIAYILA  QPWFRRNRLN LPKTLKRLTG FNAFWYSHHL FIIVYVLFVI HGYYLYLTKK WYKKTTWMYL AVPIILYACE RLIRAFRSGY KSVRILKVAV YPGNVLALHM SKPQGFKYTS GQYMFVNCSA  VSAFQWHPFS ITSAPGDEYL SIYIRTLGDW TSQLKTVFSK ACQPSNENQS GLLRADMMKG ENKPRLPKLL IDGPYGAPAQ DYKKYDVVLL VGLGIGATPL ISIVKDVLNN VKQYQELEEG  MTESNGERGN ARKPFATRRA YFYWVTREQG SFEWFRSVMN EVTENDKDGV IELHNYCTSV YEEGDARSAL IAMLQSLHHA KNGVDIVSGT RVKTHFARPN WRNVFKRVAL NHANQRVGVF 
YCGAPTLTGE LKRLALDFSR KTSTKFDFHK ENF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 14, 12 introns). An alternative splicing. VvRboh01-b has 21 aminoacides less than VvRboh01 (VQNIRGGDLETSMLASRLERQ). No EST to confirm it