Entry information : VvRboh05
Entry ID 6105
Creation 2008-02-19 (Daniel Marino)
Last sequence changes 2008-02-19 (Daniel Marino)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2009-03-01 (Christophe Dunand)
Peroxidase information: VvRboh05
Name VvRboh05
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvRboh05
start..stop
S start..stop
CsRboh01 1656 0 1..943 1..946
CclRboh01 1654 0 1..943 1..946
PtRboh03 1635 0 1..943 1..948
PtRboh02 1616 0 4..943 5..949
Literature and cross-references VvRboh05
Literature Jaillon O., et al. (2007) The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449:463-467.
Protein ref. UniProtKB_Uniparc:   A7QNH0
DNA ref. GenBank:   AM487484.1 (7476..17048)   CAAP02002659.1 (26551..17124)   CU459349 (660946..670895)
Cluster/Prediction ref. UniGene:   Vvi.19121 [3' end]
Protein sequence: VvRboh05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   943
PWM (Da):   %s   106776.19 Transmb domain:   %s   o380-402i521-543o563-585i742-759o
PI (pH):   %s   9.69
Sequence
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRGLPKHERR WASDTVPGKA MSAGSSPATE SGSAEEFVEV TLDLQDDDTI VLRSVEPATV INVDQEGSAT PASASGSRSP TSIRRSSSSR LRQFSQELKA EAVAKAKQFS QELKAELKRF  SWSHGHGSRA MSSAVASVHS AGGPGSGFDT ALAARALRRQ RAQLDRTRSG AQKALRGLRF ISAKTNSVDA WNEVQSNFDK LAKDGFLNRS DFAQCIGMKD SKEFALELFD ALSRRRRLKM  DKITRDELYE FWSQIADQSF DSRLQIFFDM VDKNEDGRIA EEEVKEIIML SASANKLSRL KEQAEEYAAL IMEELDPERL GYIELWQLET LLLQKDTYLN YSQALSYTSQ ALSQNLAGLR  KRSSIQRMST KLLYYLQENW RRIWVICLWV LIMAGLFMWK FFEYRQTKAF HVMGYCLLTA KGAAETLKFN MALILLPVCR NTITWLRSTK LGLFVPFDDN INFHKTIAGA IVVGVILHAG  NHLACDFPRL EKATQINYND YLIEFGSDKP TYADLVRGKE GVTGILMVLL MLIAFTLATR WFRRSLVKLP KPFDRITGFN AFWYSHHLFV IVYILLIIHG TYLYLVHKWY LKTTWMYLAV  PVCLYAGERT LRLFRSGFYA VRLLKVAIYP GNVLTLQMSK PPQFRYKSGQ YMFVQCPAVS PFEWHPFSIT SAPGDDFLSI HIRQLGDWTQ ELKRVFSEAC EAPIAGKSGL LRADESTKKS  LPKLLIDGPY GAPAQDYKKY DVLLLVGLGI GATPFISILK DLLNNIVKME EQDSVSDFSR ISDQSAGTTD SPSLNRISPK RRKTLKTTNA YFYWVTREQG SFDWFKGVMN EVAELDQRGV 
IEMHNYLTSV YEEGDARSAL ITMVQALNHA KNGVDIVSGT RVRTHFARPN WKKVFSKTAT KHANARIGVF YCGAPVLAKE LSRLCYEFNQ KGSTKFEFHK EHF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 13 introns) and 3 ESTs. Cultivar="PN40024" and "Pinot noir".