Entry information : SaRboh03(SaNOX3)
Entry ID 6121
Creation 2008-02-21 (Daniel Marino)
Last sequence changes 2008-02-21 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-11 (Christophe Dunand)
Peroxidase information: SaRboh03(SaNOX3)
Name SaRboh03(SaNOX3)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaRboh03
start..stop
S start..stop
NtRboh04_BelW3 1427 0 1..901 1..938
NbRboh02 1422 0 1..901 1..939
LeRboh02 1414 0 1..901 1..938
NtRboh04_bottom 1408 0 1..901 1..939
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1844228..1844843 616 N° 2 1844007..1844122 116 N° 3 1843638..1843751 114 N° 4 1842749..1843558 810
N° 5 1842561..1842656 96 N° 6 1842254..1842369 116 N° 7 1841979..1842081 103 N° 8 1841236..1841309 74
N° 9 1839899..1840449 551 N° 10 1839448..1839557 110  
complement(join(1839448..1839557,1839899..1840449,1841236..1841309,1841979..1842 081,1842254..1842369,1842561..1842656,1842749..1843558,1843638..1843751,1844007. .1844122,1844228..1844843))


exon

Literature and cross-references SaRboh03(SaNOX3)
Literature Liang L., Palmer A.G. and Lynn D.G.Cloning and functional analyses of three gp91phox homologs in Striga asiatica. Direct submission
Protein ref. GenBank:   GER48533.1   ABG35768.1 [Other strain]
Protein sequence: SaRboh03(SaNOX3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   901
PWM (Da):   %s   100546.88 Transmb domain:   %s   i98-120o146-168i328-345o
PI (pH):   %s   9.93
Sequence
Send to BLAST
Send to Peroxiscan
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MQNPESSQQH RPNSSDSDAP APGEKPAAAA SNSDPLSKRP ARKSARFSVP EASSANPGGS GSGAGASAPG GEDYVEITLD VRDDSVAVHS VKAAGGGEVE DPELALLAKG LEKRTSLGSI  LVRNASSRIR QVSQELKRLA STTRRPHPAG VFDRNKSAAA HALKGLKFIS KTDGGAAWAG VEQRFDELTA NLDGLLPRSL FGQCIGMNKE SKEFAGELFD ALARRRNIVR GSITKAQLKE  FWDQIITLSA SANKLSNIQK QADEYARLIM EELDPNELGY IMIENLEMLL LQGPSQSVRG GAESRNLSKM LSEKLKPTQD TFIRRKYRDF HYFVLDNWQR LWVMALWIAI MAGLFTYKYI  QYRNRAVFKV MGHCVCMAKG AAETLKLNMA LILLPVCRNT ITWLRNRTKL GVAVPFDDNL NFHKVIAIAI SLGVGIHAIS HLTCDFPRLL AATPKEYEPM EQFFGKQATS YWHFVLSWEG  ITGVVIVVLM AIAFTLATPW FRRNRVDLPR PFNKLTGFNA FWYSHHLFVI VYALLIIHGI KLYLTHEWYK KTTWMYLTVP IMLYAGERLI RAFRSSIKAV KILKVAVYPG NVLALHMSKP  QGFKYKSGQY IFVNCAAVSP FEWHPFSITS APRDDYVSVH IRTLGDWTRQ LKAVFAEVCQ PPPTGKSGLL RADFMQGENN PNFPRVLIDG PYGAPTQDYK DYDVVLLVGL GIGATPMISV  VKDIVNNIKA MDEEEGGATR GSTPNASPLS TPRRKSGSDR RDFKTRRAYF YWVTREQGSF DWFKGVMNEV SEMDHKGVIE MHNYCTSVYE EGDARSALIT MLQSLNHAKN GVDVVSGTRV 
KSHFAKPNWR TVYKRIALNH PTARVGVFYC GAPPPVKELR QLASDFSHRT TTKFEFHKEN F 

Retrieve as FASTA  
Remarks Complete sequence from genomic
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGAACC CGGAAAGCAG TCAACAGCAC CGCCCCAACA GCTCCGACTC CGACGCCCCT GCCCCCGGAG AGAAGCCGGC AGCGGCGGCG TCGAACAGCG ACCCGCTTAG CAAGCGCCCG  GCCCGGAAGA GCGCACGGTT CAGCGTCCCC GAGGCATCCT CTGCCAACCC CGGCGGATCT GGCTCCGGCG CCGGCGCCTC CGCCCCCGGC GGGGAGGACT ACGTGGAGAT TACCCTTGAC  GTGCGGGATG ACTCGGTAGC AGTGCACAGC GTGAAAGCCG CGGGCGGCGG TGAGGTGGAG GATCCGGAGC TGGCTTTGCT GGCCAAGGGC CTCGAGAAGA GGACGTCCCT CGGCTCCATC  CTCGTGCGAA ACGCCTCGTC AAGGATCCGC CAGGTGTCGC AGGAGCTCAA GCGGCTGGCC TCCACCACGC GCCGACCCCA CCCAGCGGGT GTATTTGACC GGAACAAGTC CGCGGCTGCC  CACGCGCTCA AGGGACTCAA GTTCATCAGC AAGACTGACG GGGGAGCCGC CTGGGCTGGA GTGGAACAGA GGTTCGATGA ACTTACGGCT AACTTGGACG GCTTGCTCCC ACGCTCCCTT  TTCGGGCAAT GCATTGGTAT GAATAAGGAG TCGAAGGAGT TTGCCGGCGA GCTTTTCGAT GCCCTGGCTA GGCGGAGGAA CATCGTCAGA GGTTCGATTA CCAAAGCACA GCTCAAGGAG  TTTTGGGATC AGATTATTAC CCTAAGTGCC TCTGCAAACA AGCTGTCAAA CATCCAAAAA CAAGCCGATG AATACGCGAG ACTGATCATG GAGGAATTAG ACCCCAACGA ACTCGGATAC  ATAATGATCG AGAACTTGGA GATGTTACTC CTGCAAGGAC CAAGCCAATC CGTGAGAGGC GGTGCCGAAA GCCGTAACCT AAGCAAGATG CTAAGCGAGA AGCTTAAGCC AACACAAGAC  ACCTTCATAA GAAGAAAGTA CAGAGACTTT CACTACTTTG TGCTCGACAA CTGGCAAAGA CTATGGGTGA TGGCGCTGTG GATCGCGATA ATGGCAGGCC TCTTCACTTA CAAGTACATA  CAATACAGAA ATAGAGCCGT TTTCAAAGTC ATGGGCCATT GTGTGTGCAT GGCCAAAGGG GCCGCCGAGA CTCTAAAACT CAACATGGCC TTGATTTTGC TGCCCGTGTG CCGCAACACC  ATAACCTGGC TCAGGAACAG GACAAAACTC GGAGTCGCTG TCCCGTTTGA CGACAACCTT AATTTTCACA AAGTAATTGC CATAGCAATT TCGTTAGGTG TAGGGATACA CGCGATTTCC  CATTTAACGT GCGATTTTCC GCGGCTACTA GCAGCCACGC CGAAAGAATA CGAGCCTATG GAGCAATTTT TTGGCAAGCA AGCAACGAGC TATTGGCATT TCGTGTTGAG CTGGGAAGGG  ATAACTGGGG TTGTAATCGT GGTTCTAATG GCCATAGCTT TTACACTTGC AACACCGTGG TTTAGGAGGA ATAGGGTCGA CTTGCCGAGA CCTTTCAACA AGCTCACGGG GTTCAATGCG  TTTTGGTATT CGCACCACTT GTTTGTTATT GTCTATGCAC TCCTCATTAT TCATGGCATC AAACTTTACT TGACACATGA ATGGTACAAG AAAACGACAT GGATGTATCT GACTGTTCCA  ATCATGCTCT ATGCTGGGGA AAGATTGATC AGGGCATTCA GGTCTAGCAT CAAGGCTGTT AAGATCTTAA AGGTGGCTGT CTACCCAGGA AATGTATTGG CTCTGCACAT GTCAAAGCCA  CAAGGATTCA AATACAAAAG TGGGCAATAC ATTTTTGTCA ACTGTGCAGC AGTTTCTCCA TTTGAATGGC ACCCATTTTC CATCACTTCA GCACCCAGGG ATGATTATGT GAGCGTTCAC  ATAAGGACTC TTGGTGATTG GACCAGGCAA CTCAAAGCTG TCTTCGCAGA GGTTTGTCAG CCACCACCTA CGGGAAAGAG TGGGCTCCTT AGGGCTGACT TTATGCAAGG AGAGAACAAT  CCCAACTTTC CGCGTGTCTT GATCGACGGT CCATACGGTG CACCCACGCA GGATTACAAA GACTACGACG TGGTCCTGCT GGTCGGGCTC GGAATCGGAG CCACACCTAT GATAAGCGTC  GTGAAAGACA TCGTGAACAA CATAAAGGCC ATGGACGAGG AGGAGGGTGG GGCCACGCGG GGCTCCACAC CCAACGCAAG CCCTCTATCG ACCCCTAGGA GGAAGTCGGG TTCTGATAGG  CGCGACTTCA AGACTCGGAG GGCTTACTTC TATTGGGTCA CGAGGGAACA GGGCTCGTTC GACTGGTTCA AGGGCGTAAT GAACGAGGTG TCTGAAATGG ACCACAAAGG AGTGATCGAG  ATGCACAATT ACTGCACGAG TGTGTATGAG GAGGGAGATG CTCGATCGGC TTTGATCACA ATGCTTCAAT CACTTAACCA TGCCAAGAAT GGGGTTGATG TCGTATCGGG AACTAGGGTT  AAGTCGCATT TTGCGAAACC TAACTGGCGA ACTGTCTATA AGCGTATAGC ACTTAATCAT CCTACGGCAC GAGTCGGAGT GTTTTATTGT GGGGCGCCAC CACCAGTGAA GGAACTAAGG 
CAACTAGCAT CTGATTTTTC TCACAGAACC ACCACAAAGT TCGAATTCCA CAAAGAAAAC TTTTGA 

Retrieve as FASTA