Entry information : SeKat1 (srpA)
Entry ID 6125
Creation 2008-03-26 (Marcel Zamocky)
Last sequence changes 2008-03-26 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-03-28 (Christophe Dunand)
Peroxidase information: SeKat1 (srpA)
Name (synonym) SeKat1 (srpA)
Class Catalase    [Orthogroup: Kat004]
Taxonomy Bacteria Cyanobacteria Synechococcus
Organism Synechococcus elongatus    [TaxId: 32046 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SeKat1
start..stop
S start..stop
CtesKat1 389 4e-136 9..338 28..356
SpomKat01 120 9e-31 52..335 54..351
MpaKat01 112 8e-28 54..338 52..349
TgKat01 109 7e-27 52..335 58..354
Literature and cross-references SeKat1 (srpA)
Literature [1] Nicholson M.L., Laudenbach D.E.Genes encoded on a cyanobacterial plasmid are transcriptionally regulated by sulfur availability and CysR. J. Bacteriol. 177:2143-2150(1995).
[2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P. Complete sequence of plasmid 1 of Synechococcus elongatus PCC 7942. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.
Protein ref. GenBank:   YP_398718 UniProtKB:   Q55025
DNA ref. GenBank:   AF441790 (32980..33999)
Protein sequence: SeKat1 (srpA)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339
PWM (Da):   %s   36919.06 Transmb domain:   %s   i12-34o
PI (pH):   %s   9.81
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIRIRNRWFR WLAIALASLV ASIGIATVGF AATGVTPDQV LSAIEGTFGV NVGQRRNHIK GTCAVGNFVA TTEAKTYSRS PLFSGQSIPV VARFSLAGGN PKAPDTAKNP RGLGLQFQLP  NNRFLNMALL NTPVFGVASP EGFYENILAI RPDPTTGKPD PEKVKAFREK YPENKAQAAF LASNNPPTSY ANTSYFGLHA FKFINQTNQT RLVRWQFVPQ DGEKRLTDAE LQAAPANFLE 
QKLIERTQDS PVKWDFWITL GQPGDAEDNP TIAWPSDRQQ VKVGTLTLTA ASPQPGAACE GINYDPLVLS DGIEPTNDPV LQFRSGVYAL SYSKRTRGL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (plasmid pANL). Strain="PCC 7942". Signal sequence pos.1-31. Enter as Synechococcus sp in SwissProt.