Entry information : NtPrx08-1A (NtPrx08a)
Entry ID 62
Creation 2010-02-22 (Christophe Dunand)
Last sequence changes 2011-04-15 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-15 (Christophe Dunand)
Peroxidase information: NtPrx08-1A (NtPrx08a)
Name (synonym) NtPrx08-1A (NtPrx08a)
Class Class III peroxidase     [Orthogroup: Prx019]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx08-1A
start..stop
S start..stop
NtPrx08-1B 364 8e-129 6..192 129..315
StPrx58 346 7e-122 6..192 129..315
LePrx47 345 3e-121 6..192 129..315
AtPrx17 316 5e-110 6..190 128..312
Literature and cross-references NtPrx08-1A (NtPrx08a)
Literature Lein,W., Usadel,B., Stitt,M., Reindl,A., Ehrhardt,T., Sonnewald,U. and Boernke,F. Large-scale phenotyping of transgenic tobacco plants (Nicotiana tabacum) to identify essential leaf functions. Plant Biotechnol J 6 (3), 246-263 (2008)
EST ref. GenBank:   AM804895.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.18555
Protein sequence: NtPrx08-1A (NtPrx08a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   192
PWM (Da):   %s   21438.8  
PI (pH):   %s   5.34
Sequence
Send to BLAST
Send to Peroxiscan
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MRPLLEMLCL TGGPNWEVKL GRLDSLTASQ EDSNQIMPSP RSNATYLIDL FSRYNLSIKD LVALSGSHSI GKGRCFSIVF RLYNQSGSGR PDPTIEPRFR EKLDKLCPLG GDGNVTGDLD 
ATPEIFDNQY FKDLVNGRGF LNSDQTLFTN PITREYVREF SVSQEKFFNA FVEGMIKMGD LLSGRPGEIR RD 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (AM802641.1). Strain="SNN". Unigene compiles ESTs from both alleles.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATGCGGCCG CTGCTAGAGA TGCTGTGTCT GACTGGAGGT CCAAATTGGG AAGTGAAGTT GGGAAGACTA GATAGTTTAA CAGCAAGTCA AGAAGATTCA AACCAGATCA TGCCAAGTCC  AAGATCAAAT GCAACATATC TCATTGATCT TTTCAGCAGA TATAATCTCT CAATCAAAGA TCTTGTAGCA CTTTCTGGTT CTCACTCCAT TGGCAAAGGA AGATGTTTTT CTATTGTCTT  TAGGCTATAT AATCAGTCCG GCTCAGGCCG GCCTGATCCT ACCATTGAAC CAAGATTCAG AGAAAAGTTA GACAAGCTTT GTCCACTTGG TGGAGATGGT AATGTAACAG GAGATTTGGA  TGCAACACCT GAGATATTTG ACAATCAATA TTTCAAAGAC TTGGTAAATG GTAGAGGGTT CTTGAATTCA GATCAAACAC TTTTTACTAA CCCTATTACA AGGGAATATG TAAGAGAATT 
TAGTGTAAGT CAGGAGAAAT TCTTTAACGC TTTTGTTGAA GGGATGATAA AGATGGGAGA CTTGCTATCT GGCCGTCCAG GTGAGATTAG ACGGGAT 

Retrieve as FASTA