Entry information : GbPrx11(Ginbil_Gb_11540)
Entry ID 6201
Creation 2008-06-27 (Christophe Dunand)
Last sequence changes 2015-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx11(Ginbil_Gb_11540)
Name GbPrx11(Ginbil_Gb_11540)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type Microsporophylls
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx11
start..stop
S start..stop
GbPrx60 538 0 4..326 8..328
PabPrx169 502 0 1..326 1..324
PtaPrx53 485 2e-174 1..326 1..324
PabPrx72 478 1e-171 23..326 22..325
Literature and cross-references GbPrx11(Ginbil_Gb_11540)
EST ref. GenBank:   EX932825.1 [5' end]
Protein sequence: GbPrx11(Ginbil_Gb_11540)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   36058.33 (33564.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.6 (8.69) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
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Send to Peroxiscan
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MVSMSVLGSA ILVIFFLWAP GTCAQATGLK KDFYLTLCPR AEDIVKEQVY NLYEEHGNTA VSWIRNIFHD CIVESCDASI LLDTTSTVVS EKGADRNFGM RNFKYINTIK NALEKECPGV  VSCADIVALA AREGIVMLGG PRIADMKTGR RDSRKSSAAV VEKYVPNHND SLSTVLSRFA SLGIDAEGVA ALLGAHTVGR MHCVNLVERL YPKVDPTIAP NYALYLKGRC PTPKPDPTAV 
VYARNDRGTP MKFDNNYYKN LIANKGLLRV DQQLASDPRT SSYVKRMADD KQYFFSQFSR AVITLSENNP LTGSQGEIRK DCRFLNP 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (gba_locus_12823_iso_5_len_1364_ver_2) and 1 EST.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAGTA TGAGCGTGTT GGGGTCGGCC ATTTTGGTCA TTTTCTTCCT CTGGGCACCC GGAACATGTG CTCAGGCAAC TGGGTTGAAG AAGGATTTCT ACCTAACGCT GTGTCCGCGG  GCAGAGGATA TTGTGAAGGA ACAAGTCTAC AATCTGTACG AAGAACATGG CAACACTGCT GTTTCATGGA TCAGAAATAT CTTCCACGAT TGTATCGTTG AGTCGTGCGA TGCTTCCATT  CTGCTAGATA CCACTTCCAC AGTGGTTTCT GAGAAAGGGG CTGATAGAAA CTTTGGAATG CGCAACTTCA AGTATATCAA CACCATTAAG AATGCATTGG AGAAAGAGTG TCCAGGAGTA  GTCTCTTGCG CCGACATTGT CGCCCTCGCT GCCAGAGAGG GAATTGTCAT GCTTGGAGGG CCACGCATCG CGGATATGAA AACGGGACGG AGAGACAGCA GAAAAAGCAG CGCAGCAGTT  GTTGAGAAAT ACGTGCCAAA CCATAACGAC AGCCTCTCCA CTGTCTTATC TCGCTTCGCA TCTCTGGGCA TTGACGCGGA AGGAGTTGCA GCCCTCCTAG GAGCGCACAC AGTTGGAAGA  ATGCACTGCG TGAATCTAGT GGAGAGGCTT TACCCCAAAG TGGATCCCAC CATCGCTCCA AATTACGCTC TCTATCTCAA AGGCCGATGC CCAACACCGA AGCCAGATCC GACGGCAGTT  GTGTACGCAC GCAACGACCG TGGAACGCCC ATGAAATTCG ACAACAATTA TTACAAGAAC TTGATTGCCA ACAAGGGACT GCTACGCGTC GATCAGCAGT TGGCATCGGA TCCCAGAACC  TCTTCCTATG TAAAACGAAT GGCCGATGAC AAACAATATT TCTTCTCCCA ATTCTCCAGA GCTGTTATAA CTTTATCGGA GAACAATCCT CTCACAGGAA GTCAGGGTGA AATCAGAAAA 
GATTGCCGAT TTCTTAATCC CTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCACCCGG AACATGTGCT CAGGCAGGTG CCTCATTCGA GAACTTTGTT TTAGTACCTT TTTTGTTTTT AGACAGAGAT CATAGCCAAT AGCCAACTCA GGAAGAGATG GTGAGTATGA  GCGTGTTGGG GTCGGCCATT TTGGTCATTT TCTTCCTCTG GGCACCCGGA ACATGTGCTC AGGCAACTGG GTTGAAGAAG GATTTCTACC TAACGCTGTG TCCGCGGGCA GAGGATATTG  TGAAGGAACA AGTCTACAAT CTGTACGAAG AACATGGCAA CACTGCTGTT TCATGGATCA GAAATATCTT CCACGATTGT ATCGTTGAGT CGTGCGATGC TTCCATTCTG CTAGATACCA  CTTCCACAGT GGTTTCTGAG AAAGGGGCTG ATAGAAACTT TGGAATGCGC AACTTCAAGT ATATCAACAC CATTAAGAAT GCATTGGAGA AAGAGTGTCC AGGAGTAGTC TCTTGCGCCG  ACATTGTCGC CCTCGCTGCC AGAGAGGGAA TTGTCATGCT TGGAGGGCCA CGCATCGCGG ATATGAAAAC GGGACGGAGA GACAGCAGAA AAAGCAGCGC AGCAGTTGTT GAGAAATACG  TGCCAAACCA TAACGACAGC CTCTCCACTG TCTTATCTCG CTTCGCATCT CTGGGCATTG ACGCGGAAGG AGTTGCAGCC CTCCTAGGAG CGCACACAGT TGGAAGAATG CACTGCGTGA  ATCTAGTGGA GAGGCTTTAC CCCAAAGTGG ATCCCACCAT CGCTCCAAAT TACGCTCTCT ATCTCAAAGG CCGATGCCCA ACACCGAAGC CAGATCCGAC GGCAGTTGTG TACGCACGCA  ACGACCGTGG AACGCCCATG AAATTCGACA ACAATTATTA CAAGAACTTG ATTGCCAACA AGGGACTGCT ACGCGTCGAT CAGCAGTTGG CATCGGATCC CAGAACCTCT TCCTATGTAA  AACGAATGGC CGATGACAAA CAATATTTCT TCTCCCAATT CTCCAGAGCT GTTATAACTT TATCGGAGAA CAATCCTCTC ACAGGAAGTC AGGGTGAAAT CAGAAAAGAT TGCCGATTTC  TTAATCCCTG AAACGGCGAA TTCTTCTCAT CAGCATTCTT CCTGCAAATA TGTAGGCTGC CGGTAATACT TTTGTATGTC CTCTCTGTAA AAAGATTGGC AATAAAACTC TGTTGTAATG  TGAAGATTGT ATGGATGCTG ATTATGTAAC TCAACATCAC TAGTTTTTCC ATGGTTAAAC CTGTTGGTGG TGAAGTTCAA TAATTTGTGT GTAAAGTGCC AAACATTACC CAAACCCAAG 
TCCCCACGCT CAAAATGGAA TTTCTATTTA AAAGCATGCT GCAG 

Retrieve as FASTA