Entry information : LePrx24 (Solyc02g084790.2.1[2.3])
Entry ID 622
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-26 (Christophe Dunand)
Peroxidase information: LePrx24 (Solyc02g084790.2.1[2.3])
Name (synonym) LePrx24 (Solyc02g084790.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Callus
Roots
Seedlings
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx24
start..stop
S start..stop
StPrx10 663 0 1..332 1..332
LePrx70 650 0 1..332 1..332
StPrx12 637 0 1..332 1..332
NtPrx35-1A 635 0 1..330 1..330
Literature and cross-references LePrx24 (Solyc02g084790.2.1[2.3])
Literature Alcala,J. et al., unpublished
Cluster/Prediction ref. UniGene:   les.6908
Protein sequence: LePrx24 (Solyc02g084790.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (310)
PWM (Da):   %s   36486.52 (33919.3)  
PI (pH):   %s   9.53 (9.52) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARSMSFFIF IALLAFSPIC FSFKSNNDKL YPQYYYKSCP RALEIVKSVV AKAVAKEARM AASLLRLHFH DCFVKGCDAS LLLDSSNGIV TEKGSNPNRN SARGFEVLDE IKSALEKECP  QTVSCADILA LAARDSTVLA GGPNWEVPLG RRDSRSASLS GSNNNIPAPN NTFDSILSKF KRQGLDLVDL IALSGSHTIG NSRCTSFRQR LYNQSGNNKP DSTLDESYAA QLRNRCPKSG 
GDQNLFFLDF VSPTKFDNSY FKLLLASKGL LNSDQVLTTK SRESLALVKQ YAENNALFFD HFAKSMVKMG NISPLTGSSG EIRKTCRKIN SS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 3 introns) and 5 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCGGT CCATGAGTTT CTTCATTTTC ATTGCTCTGC TTGCTTTTTC ACCAATTTGT TTCTCTTTTA AGAGTAACAA TGATAAACTA TACCCGCAAT ACTATTATAA ATCATGCCCA  CGAGCTTTAG AAATTGTCAA GTCTGTTGTT GCCAAGGCTG TTGCCAAAGA AGCCCGAATG GCTGCTTCTC TGTTGAGGCT CCATTTCCAC GACTGTTTTG TCAAGGTAAA ACACACATAT  ATATGCTGTT GAATATCAGT AGTGCATTGA CTATACCGTG TTGAATATAC ATATAATATA AGTTGTATGA TGAACGATAT CGACATGTCA GAAAGTAATT ACAAGATGGA AACACTTCGA  ACAGTAAGTG CACTAGCATA CTAGCATGCA AAAATACACT TGCTAAATGT TGCTTTTACA CCGAGAGTGT AAACTGATGG CTAGTTATTG TTTCACTATG TGATGTAGGG ATGTGATGCA  TCTTTGCTTC TGGATAGTAG CAATGGTATT GTGACAGAAA AAGGATCAAA CCCCAACAGG AATTCAGCTC GTGGATTCGA AGTCCTTGAC GAGATTAAAT CTGCACTAGA GAAGGAATGT  CCTCAAACTG TTTCTTGTGC TGATATCTTG GCACTTGCTG CAAGGGATTC TACTGTACTG GTAAGTACTG CCACAGCATA TATAGTGTGA TCAGAGTACC TCCTCAAGAA TTAATAAAAC  ACGAGCTTAC TTTTTTCGTT CATACAGGCT GGTGGACCAA ACTGGGAGGT TCCATTAGGA AGAAGAGACT CCAGAAGCGC TAGTCTAAGT GGCTCCAACA ACAATATTCC TGCTCCAAAC  AACACATTTG ATTCCATTCT CTCAAAGTTC AAGAGACAAG GACTTGATCT TGTTGACCTT ATAGCTTTGT CCGGTAAGTG TTACTCTTTT TTTTTTTTCC TGTTGGATTG CTCTTTCCTT  CTAAGTTCTT TCCTTGACAT TGCTGAATTT TTAGCCAGAC TAGTTATCAG ACATGAAATC ATAGTTAACA CCGATAAGTT GTAATGCAGG AAGCCACACA ATTGGAAATT CAAGATGTAC  CAGCTTCAGA CAAAGGCTCT ACAACCAGTC AGGAAATAAT AAACCAGACT CAACTCTGGA TGAATCATAT GCTGCCCAAT TGCGCAATAG ATGCCCAAAA TCTGGTGGTG ACCAAAACTT  ATTCTTCTTG GACTTTGTTT CCCCAACAAA ATTTGATAAC AGCTACTTCA AGCTCTTGTT GGCTTCAAAG GGTCTGTTGA ATTCTGACCA AGTTCTTACT ACTAAGAGTC GAGAATCATT  AGCCTTGGTG AAGCAATATG CAGAGAACAA TGCACTTTTC TTCGACCACT TCGCCAAGTC TATGGTAAAG ATGGGGAACA TTTCTCCTTT GACAGGTTCC AGTGGAGAAA TCAGGAAGAC 
TTGCAGGAAG ATCAACTCAT CATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCGGT CCATGAGTTT CTTCATTTTC ATTGCTCTGC TTGCTTTTTC ACCAATTTGT TTCTCTTTTA AGAGTAACAA TGATAAACTA TACCCGCAAT ACTATTATAA ATCATGCCCA  CGAGCTTTAG AAATTGTCAA GTCTGTTGTT GCCAAGGCTG TTGCCAAAGA AGCCCGAATG GCTGCTTCTC TGTTGAGGCT CCATTTCCAC GACTGTTTTG TCAAGGGATG TGATGCATCT  TTGCTTCTGG ATAGTAGCAA TGGTATTGTG ACAGAAAAAG GATCAAACCC CAACAGGAAT TCAGCTCGTG GATTCGAAGT CCTTGACGAG ATTAAATCTG CACTAGAGAA GGAATGTCCT  CAAACTGTTT CTTGTGCTGA TATCTTGGCA CTTGCTGCAA GGGATTCTAC TGTACTGGCT GGTGGACCAA ACTGGGAGGT TCCATTAGGA AGAAGAGACT CCAGAAGCGC TAGTCTAAGT  GGCTCCAACA ACAATATTCC TGCTCCAAAC AACACATTTG ATTCCATTCT CTCAAAGTTC AAGAGACAAG GACTTGATCT TGTTGACCTT ATAGCTTTGT CCGGAAGCCA CACAATTGGA  AATTCAAGAT GTACCAGCTT CAGACAAAGG CTCTACAACC AGTCAGGAAA TAATAAACCA GACTCAACTC TGGATGAATC ATATGCTGCC CAATTGCGCA ATAGATGCCC AAAATCTGGT  GGTGACCAAA ACTTATTCTT CTTGGACTTT GTTTCCCCAA CAAAATTTGA TAACAGCTAC TTCAAGCTCT TGTTGGCTTC AAAGGGTCTG TTGAATTCTG ACCAAGTTCT TACTACTAAG  AGTCGAGAAT CATTAGCCTT GGTGAAGCAA TATGCAGAGA ACAATGCACT TTTCTTCGAC CACTTCGCCA AGTCTATGGT AAAGATGGGG AACATTTCTC CTTTGACAGG TTCCAGTGGA 
GAAATCAGGA AGACTTGCAG GAAGATCAAC TCATCATAA 

Retrieve as FASTA