Entry information : PsiKat02
Entry ID 6231
Creation 2008-07-09 (Christophe Dunand)
Last sequence changes 2008-07-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2008-07-09 (Christophe Dunand)
Peroxidase information: PsiKat02
Name PsiKat02
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea sitchensis (Sitka spruce)    [TaxId: 3332 ]
Cellular localisation N/D
Tissue types Mixed tissues
Roots
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsiKat02
start..stop
S start..stop
SsKat01_AU1 813 0 1..486 1..486
SsKat02_AU1 811 0 1..492 1..492
PpaKat02 803 0 1..492 1..492
PpaKat01 802 0 1..492 1..492
Literature and cross-references PsiKat02
Literature Ralph,S.G., Kirkpatrick,R., Chun,H.J.E., Palmquist,D., Wynhoven,B., Kolosova,N., Cooper,N., Oddy,C., Jancsik,S., Ritland,C.E., Douglas,C.J., Butterfield,Y.S.N., Liu,J., Stott,J., Yang,G., Barber,S., Holt,R.A., Siddiqui,A., Jones,S.J.M., Marra,M.A., Ritland,K. and Bohlmann,J. The spruce transcriptome: Analysis of ca. 6,500 sequence-verified full-length cDNAs
mRNA ref. GenBank:   EF085236
Cluster/Prediction ref. UniGene:   Psi.16348
Protein sequence: PsiKat02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   492
PWM (Da):   %s   56704.27  
PI (pH):   %s   7.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPYKHRPSS AYNSPYLTTN QGAPVWNNTS SLTVGARGPV LLEDYHLIEK FAAFDRERIP ERVVHARGAS AKGFFEVTHY VSNLTCADFL RAPGVQTPVI VRFSTVIHER GSPETIRDPR  GFAVKFYTRE GNFDIVGNNI PVFFTRDAMQ FPDVIRALKP NPKTHIQEPW RYLDFMSHLP ESCLTFLYWF DDWGIPSDYR HMDGYGVHTF KLMTKEGRET YCKFHWKPTC GLKFLLDEEA  VIVGGSNHSH ATKDLTDAIA SGNYPEWKLY IQTMDPADED KLDFDPLDVS KIWPEDLFPL QPVGRLVLNK NIDNFFNENE MLAFNPGAIV PGIYYTNDKM FQTRTFAYAD TQRHRLGPNY  MQIPVNAPKC PHYNNHRDGS MNFLHRDEEV DYFPSRFDSV RACEKVPIPT DVISDRRVKT VIPKENNFKQ SGELFRSWPR DRQERFIKRF ADVASDPKVT PEIRSVWLSF WAQCDRGLGQ 
RLASRLGMKA LL 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA and 12 ESTs + 19 ESTs not compilated. Cultivar="FB3-425".